Domain ID e1fvfA1

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  • A: alpha complex topology
  • X: alpha-helical domain in sec1/munc18-like (SM) proteins
  • H: alpha-helical domain in sec1/munc18-like (SM) proteins
  • T: alpha-helical domain in sec1/munc18-like (SM) proteins
  • F: Sec1
UID: 000062305
Type: Automatic domain
Parent: e1epuA1
Range: A:235-480
PDB: 1fvf
PDB Description: SEC1
UniProt: O62547
Hsap BLAST neighbor: P61764
Species:

Structure of domain e1fvfA1

Domains in the same chain:

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e1fvfA2 A:2-132 Rossmann-like domains in Sec1/munc18-like proteins Rossmann-like domains in Sec1/munc18-like proteins Rossmann-like domains in Sec1/munc18-like proteins
e1fvfA3 A:134-237,A:484-508,A:536-591 Rossmann-like domains in Sec1/munc18-like proteins Rossmann-like domains in Sec1/munc18-like proteins Rossmann-like domains in Sec1/munc18-like proteins
e1fvfA1 A:235-480 alpha-helical domain in sec1/munc18-like (SM) proteins alpha-helical domain in sec1/munc18-like (SM) proteins alpha-helical domain in sec1/munc18-like (SM) proteins

Domains in the same PDB:

e1fvfA2 A:2-132 Rossmann-like domains in Sec1/munc18-like proteins Rossmann-like domains in Sec1/munc18-like proteins Rossmann-like domains in Sec1/munc18-like proteins
e1fvfA3 A:134-237,A:484-508,A:536-591 Rossmann-like domains in Sec1/munc18-like proteins Rossmann-like domains in Sec1/munc18-like proteins Rossmann-like domains in Sec1/munc18-like proteins
e1fvfA1 A:235-480 alpha-helical domain in sec1/munc18-like (SM) proteins alpha-helical domain in sec1/munc18-like (SM) proteins alpha-helical domain in sec1/munc18-like (SM) proteins
e1fvfB2 B:2-132 Rossmann-like domains in Sec1/munc18-like proteins Rossmann-like domains in Sec1/munc18-like proteins Rossmann-like domains in Sec1/munc18-like proteins
e1fvfB3 B:134-237,B:484-508,B:536-591 Rossmann-like domains in Sec1/munc18-like proteins Rossmann-like domains in Sec1/munc18-like proteins Rossmann-like domains in Sec1/munc18-like proteins
e1fvfB1 B:235-480 alpha-helical domain in sec1/munc18-like (SM) proteins alpha-helical domain in sec1/munc18-like (SM) proteins alpha-helical domain in sec1/munc18-like (SM) proteins

Structural contacts of domain e1fvfA1 of H-group "alpha-helical domain in sec1/munc18-like (SM) proteins":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e1fvfB1 A:X,Y,Z->B:x,y,z alpha-helical domain in sec1/munc18-like (SM) proteins Interaction Interface Pymol
e1fvfB1 A:x,y,z->B:X-Y,-Y+1,-Z+2/3 alpha-helical domain in sec1/munc18-like (SM) proteins Interaction Interface Pymol
e1fvfB1 A:x,y,z->B:X-Y,-Y+1,-Z+2/3 alpha-helical domain in sec1/munc18-like (SM) proteins Interaction Interface Pymol
e1fvfA1 A:x,y,z->A:Y,X,-Z+1 alpha-helical domain in sec1/munc18-like (SM) proteins Interaction Interface Pymol
e1fvfA1 A:Y,X,-Z+1->A:x,y,z alpha-helical domain in sec1/munc18-like (SM) proteins Interaction Interface Pymol