ECOD: domain e1fyfB2

Domain ID e1fyfB2

A: a/b three-layered sandwiches
X: Anticodon-binding domain of Class II aaRS
H: Anticodon-binding domain of Class II aaRS
T: Anticodon-binding domain of Class II aaRS
F: HGTP_anticodon

UID:	000107437
Type:	Automatic domain
Parent:	e1kmmA2
Range:	B:533-642
PDB:	1fyf
PDB Description:	THREONYL-TRNA SYNTHETASE
UniProt:	P0A8M3
Hsap BLAST neighbor:	P26639
Species:	Escherichia coli

Domain
In chain context
In PDB context

Structure of domain e1fyfB2

Domains in the same chain:

Download Pymol

e1fyfB1	B:242-532	Class II aaRS and biotin synthetases	Class II aaRS and biotin synthetases	Class II aaRS and biotin synthetases
e1fyfB2	B:533-642	Anticodon-binding domain of Class II aaRS	Anticodon-binding domain of Class II aaRS	Anticodon-binding domain of Class II aaRS

Domains in the same PDB:

e1fyfA1	A:242-532	Class II aaRS and biotin synthetases	Class II aaRS and biotin synthetases	Class II aaRS and biotin synthetases
e1fyfA2	A:533-642	Anticodon-binding domain of Class II aaRS	Anticodon-binding domain of Class II aaRS	Anticodon-binding domain of Class II aaRS
e1fyfB1	B:242-532	Class II aaRS and biotin synthetases	Class II aaRS and biotin synthetases	Class II aaRS and biotin synthetases
e1fyfB2	B:533-642	Anticodon-binding domain of Class II aaRS	Anticodon-binding domain of Class II aaRS	Anticodon-binding domain of Class II aaRS

Structural contacts of domain e1fyfB2 of H-group "Anticodon-binding domain of Class II aaRS":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e1fyfA1	B:x,y,z->A:X,Y,Z	Class II aaRS and biotin synthetases	Interaction Interface Pymol
e1fyfA1	B:-X+1,Y-1/2,-Z+1/2->A:x,y,z	Class II aaRS and biotin synthetases	Interaction Interface Pymol