ECOD: domain e1gbnB2

Domain ID e1gbnB2

A: a/b three-layered sandwiches
X: PLP-dependent transferases
H: PLP-dependent transferases
T: PLP-dependent transferases
F: Aminotran_3

UID:	001152472
Type:	Automatic domain
Parent:	e1zodA3
Range:	B:38-345
Ligands:	GAB GBC
DrugDomain:	DB00114 DB02054
PDB:	1gbn
PDB Description:	ORNITHINE AMINOTRANSFERASE
UniProt:	P04181
Hsap BLAST neighbor:	P04181
Species:	Homo sapiens

Domains in the same chain:

Download Pymol

e1gbnB2	B:38-345	PLP-dependent transferases	PLP-dependent transferases	PLP-dependent transferases
e1gbnB3	B:346-439	C-terminal domain in some PLP-dependent transferases	C-terminal domain in some PLP-dependent transferases	C-terminal domain in some PLP-dependent transferases

Domains in the same PDB:

e1gbnA2	A:38-345	PLP-dependent transferases	PLP-dependent transferases	PLP-dependent transferases
e1gbnA3	A:346-439	C-terminal domain in some PLP-dependent transferases	C-terminal domain in some PLP-dependent transferases	C-terminal domain in some PLP-dependent transferases
e1gbnB2	B:38-345	PLP-dependent transferases	PLP-dependent transferases	PLP-dependent transferases
e1gbnB3	B:346-439	C-terminal domain in some PLP-dependent transferases	C-terminal domain in some PLP-dependent transferases	C-terminal domain in some PLP-dependent transferases
e1gbnC2	C:38-345	PLP-dependent transferases	PLP-dependent transferases	PLP-dependent transferases
e1gbnC3	C:346-439	C-terminal domain in some PLP-dependent transferases	C-terminal domain in some PLP-dependent transferases	C-terminal domain in some PLP-dependent transferases

Structural contacts of domain e1gbnB2 of H-group "PLP-dependent transferases":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e1gbnA2	B:x,y,z->A:X,Y,Z	PLP-dependent transferases	Interaction Interface Pymol
e1gbnA3	B:x,y,z->A:X,Y,Z	C-terminal domain in some PLP-dependent transferases	Interaction Interface Pymol
e1gbnC2	B:X,Y,Z->C:x,y,z	PLP-dependent transferases	Interaction Interface Pymol
e1gbnA2	B:x,y,z->A:-Y+1,X-Y,Z-1/3	PLP-dependent transferases	Interaction Interface Pymol
e1gbnB2	B:x,y,z->B:Y,X,-Z	PLP-dependent transferases	Interaction Interface Pymol
e1gbnB2	B:Y,X,-Z->B:x,y,z	PLP-dependent transferases	Interaction Interface Pymol
e1gbnC3	B:Y,X-1,-Z->C:x,y,z	C-terminal domain in some PLP-dependent transferases	Interaction Interface Pymol
e1gbnC2	B:Y,X,-Z->C:x,y,z	PLP-dependent transferases	Interaction Interface Pymol