Domain ID e1gdeB2

Download files:
  • A: a/b three-layered sandwiches
  • X: PLP-dependent transferases
  • H: PLP-dependent transferases
  • T: PLP-dependent transferases
  • F: Aminotran_1_2
UID: 001152530
Type: Automatic domain
Parent: e1c7nA2
Range: B:502-781
Ligands: GLU PLP
PDB: 1gde
PDB Description: ASPARTATE AMINOTRANSFERASE
UniProt: O59096
Hsap BLAST neighbor: Q16773
Species: Pyrococcus horikoshii

Structure of domain e1gdeB2

Structural contacts of domain e1gdeB2 of H-group "PLP-dependent transferases":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e1gdeA2 B:x,y,z->A:X,Y,Z PLP-dependent transferases Interaction Interface Pymol
e1gdeA2 B:-X+1/2,-Y,Z-1/2->A:x,y,z PLP-dependent transferases Interaction Interface Pymol
e1gdeA1 B:-X+1,Y-1/2,-Z+1/2->A:x,y,z C-terminal domain in some PLP-dependent transferases Interaction Interface Pymol
e1gdeA2 B:-X+1,Y-1/2,-Z+1/2->A:x,y,z PLP-dependent transferases Interaction Interface Pymol
e1gdeB2 B:x,y,z->B:X-1,Y,Z PLP-dependent transferases Interaction Interface Pymol
e1gdeB2 B:X-1,Y,Z->B:x,y,z PLP-dependent transferases Interaction Interface Pymol
e1gdeB3 B:X-1,Y,Z->B:x,y,z C-terminal domain in some PLP-dependent transferases Interaction Interface Pymol
e1gdeA1 B:-X+3/2,-Y,Z-1/2->A:x,y,z C-terminal domain in some PLP-dependent transferases Interaction Interface Pymol