Domain ID e1gguB5

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  • A: a+b complex topology
  • X: Cysteine proteinases-like
  • H: Cysteine proteinases
  • T: Cysteine proteinases
  • F: Transglut_core
UID: 001228420
Type: Automatic domain
Parent: e2f4mA1
Range: B:189-508
Ligands: CA
PDB: 1ggu
PDB Description: PROTEIN (COAGULATION FACTOR XIII)
UniProt: P00488
Hsap BLAST neighbor: P00488
Species: Homo sapiens

Structure of domain e1gguB5

Domains in the same chain:

Download Pymol

e1gguB6 B:8-188 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e1gguB5 B:189-508 Cysteine proteinases-like Cysteine proteinases Cysteine proteinases
e1gguB2 B:516-627 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e1gguB3 B:628-727 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like

Domains in the same PDB:

e1gguA6 A:8-188 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e1gguA5 A:189-508 Cysteine proteinases-like Cysteine proteinases Cysteine proteinases
e1gguA2 A:516-627 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e1gguA3 A:628-727 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e1gguB6 B:8-188 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e1gguB5 B:189-508 Cysteine proteinases-like Cysteine proteinases Cysteine proteinases
e1gguB2 B:516-627 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e1gguB3 B:628-727 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like

Structural contacts of domain e1gguB5 of H-group "Cysteine proteinases":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e1gguA6 B:x,y,z->A:X,Y,Z Immunoglobulin-related Interaction Interface Pymol
e1gguA5 B:x,y,z->A:X,Y,Z Cysteine proteinases Interaction Interface Pymol
e1gguA5 B:x,y,z->A:X,Y-1,Z Cysteine proteinases Interaction Interface Pymol