Domain ID e1gkdA1

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  • A: mixed a+b and a/b
  • X: Zincin-like
  • H: Metalloproteases ("zincins") catalytic domain
  • T: Metalloproteases ("zincins") catalytic domain
  • F: Peptidase_M10
UID: 000118557
Type: Automatic domain
Parent: e1y93A1
Range: A:113-443
Ligands: BUM CA STN ZN
DrugDomain: DB01949 DB03683
PDB: 1gkd
PDB Description: 92 KDA TYPE IV COLLAGENASE
UniProt: P14780
Hsap BLAST neighbor: P14780
Species: Homo sapiens

Structure of domain e1gkdA1

Structural contacts of domain e1gkdA1 of H-group "Metalloproteases ("zincins") catalytic domain":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e1gkdB1 A:X,Y,Z->B:x,y,z Metalloproteases ("zincins") catalytic domain Interaction Interface Pymol
e1gkdB1 A:x,y,z->B:-Y+1/2,X+1/2,Z+1/4 Metalloproteases ("zincins") catalytic domain Interaction Interface Pymol
e1gkdB1 A:Y,X,-Z->B:x,y,z Metalloproteases ("zincins") catalytic domain Interaction Interface Pymol
e1gkdB1 A:x,y,z->B:Y-1,X,-Z Metalloproteases ("zincins") catalytic domain Interaction Interface Pymol