| UID: | 000068178 |
|---|---|
| Type: | Automatic domain |
| Parent: | e1go3E2 |
| Range: | M:1-78 |
| PDB: | 1go3 |
| PDB Description: | DNA-DIRECTED RNA POLYMERASE SUBUNIT E |
| UniProt: | Q57840 |
| Hsap BLAST neighbor: | Q9Y535 |
| Species: | Methanocaldococcus jannaschii |
Structure of domain e1go3M2
Domains in the same chain:
| e1go3M2 | M:1-78 | Dodecin subunit-like | Flavin-binding protein dodecin-like | Flavin-binding protein dodecin-like |
| e1go3M1 | M:79-181 | OB-fold | Nucleic acid-binding proteins | Nucleic acid-binding proteins |
Domains in the same PDB:
Structural contacts of domain e1go3M2 of H-group "Flavin-binding protein dodecin-like":
The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.
| Domain ID | Symmetry operator | H-group | Visualization |
|---|---|---|---|
| e1go3N1 | M:X,Y,Z->N:x,y,z | SAM/DNA-glycosylase | Interaction Interface Pymol |
| e1go3F1 | M:x,y,z->F:-Y+1,X,Z-1/4 | SAM/DNA-glycosylase | Interaction Interface Pymol |
| e1go3M1 | M:-Y,X,Z-1/4->M:x,y,z | Nucleic acid-binding proteins | Interaction Interface Pymol |
| e1go3E1 | M:x,y,z->E:-Y+1,X,Z-1/4 | Nucleic acid-binding proteins | Interaction Interface Pymol |
| e1go3N1 | M:-Y,X,Z-1/4->N:x,y,z | SAM/DNA-glycosylase | Interaction Interface Pymol |
