ECOD: domain e1gpuA2

Domain ID e1gpuA2

A: a/b three-layered sandwiches
X: Thiamin diphosphate-binding fold (THDP-binding)
H: Thiamin diphosphate-binding fold (THDP-binding)
T: Thiamin diphosphate-binding fold (THDP-binding)
F: Transket_pyr

UID:	000110811
Type:	Automatic domain
Parent:	e2r8oA2
Range:	A:338-534
Ligands:	THD
PDB:	1gpu
PDB Description:	TRANSKETOLASE 1
UniProt:	P23254
Hsap BLAST neighbor:	P29401
Species:	Saccharomyces cerevisiae

Domains in the same chain:

Download Pymol

e1gpuA3	A:3-337	Thiamin diphosphate-binding fold (THDP-binding)	Thiamin diphosphate-binding fold (THDP-binding)	Thiamin diphosphate-binding fold (THDP-binding)
e1gpuA2	A:338-534	Thiamin diphosphate-binding fold (THDP-binding)	Thiamin diphosphate-binding fold (THDP-binding)	Thiamin diphosphate-binding fold (THDP-binding)
e1gpuA1	A:535-680	TK C-terminal domain-like	TK C-terminal domain-like	TK C-terminal domain-like

Domains in the same PDB:

e1gpuA3	A:3-337	Thiamin diphosphate-binding fold (THDP-binding)	Thiamin diphosphate-binding fold (THDP-binding)	Thiamin diphosphate-binding fold (THDP-binding)
e1gpuA2	A:338-534	Thiamin diphosphate-binding fold (THDP-binding)	Thiamin diphosphate-binding fold (THDP-binding)	Thiamin diphosphate-binding fold (THDP-binding)
e1gpuA1	A:535-680	TK C-terminal domain-like	TK C-terminal domain-like	TK C-terminal domain-like
e1gpuB3	B:3-337	Thiamin diphosphate-binding fold (THDP-binding)	Thiamin diphosphate-binding fold (THDP-binding)	Thiamin diphosphate-binding fold (THDP-binding)
e1gpuB2	B:338-534	Thiamin diphosphate-binding fold (THDP-binding)	Thiamin diphosphate-binding fold (THDP-binding)	Thiamin diphosphate-binding fold (THDP-binding)
e1gpuB1	B:535-680	TK C-terminal domain-like	TK C-terminal domain-like	TK C-terminal domain-like

Structural contacts of domain e1gpuA2 of H-group "Thiamin diphosphate-binding fold (THDP-binding)":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e1gpuB2	A:X,Y,Z->B:x,y,z	Thiamin diphosphate-binding fold (THDP-binding)	Interaction Interface Pymol
e1gpuB1	A:X,Y,Z->B:x,y,z	TK C-terminal domain-like	Interaction Interface Pymol
e1gpuB3	A:X,Y,Z->B:x,y,z	Thiamin diphosphate-binding fold (THDP-binding)	Interaction Interface Pymol
e1gpuB2	A:X-1,Y,Z->B:x,y,z	Thiamin diphosphate-binding fold (THDP-binding)	Interaction Interface Pymol