ECOD: domain e1gpzA5

Domain ID e1gpzA5

A: few secondary structure elements
X: EGF-like
H: EGF-related
T: Complement control module/SCR domain
F: Sushi

UID:	001253295
Type:	Automatic domain
Parent:	e2q7zA2
Range:	A:357-435
PDB:	1gpz
PDB Description:	COMPLEMENT C1R COMPONENT
UniProt:	P00736
Hsap BLAST neighbor:	P00736
Species:	Homo sapiens

Domain
In chain context
In PDB context

Structure of domain e1gpzA5

Domains in the same chain:

Download Pymol

e1gpzA2	A:290-356	EGF-like	EGF-related	Complement control module/SCR domain
e1gpzA5	A:357-435	EGF-like	EGF-related	Complement control module/SCR domain
e1gpzA4	A:434-686	cradle loop barrel	RIFT-related	FMN-binding split barrel 2

Domains in the same PDB:

Structural contacts of domain e1gpzA5 of H-group "EGF-related":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e1gpzB4	A:-X+3/2,-Y,Z-1/2->B:x,y,z	RIFT-related	Interaction Interface Pymol
e1gpzA4	A:x,y,z->A:-X+1,Y-1/2,-Z+1/2	RIFT-related	Interaction Interface Pymol
e1gpzB2	A:x,y,z->B:-X+1,Y-1/2,-Z+1/2	EGF-related	Interaction Interface Pymol