Domain ID e1gtvB1

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  • A: a/b three-layered sandwiches
  • X: P-loop domains-like
  • H: P-loop domains-related
  • T: P-loop containing nucleoside triphosphate hydrolases
  • F: Thymidylate_kin
UID: 000101010
Type: Automatic domain
Parent: e1nn5A1
Range: B:1-208
Ligands: ACT MG SO4 TMP TYD
PDB: 1gtv
PDB Description: THYMIDYLATE KINASE
UniProt: P9WKE1
Hsap BLAST neighbor: P23919
Species: Mycobacterium tuberculosis

Structure of domain e1gtvB1

Structural contacts of domain e1gtvB1 of H-group "P-loop domains-related":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e1gtvA1 B:x,y,z->A:X,Y,Z P-loop domains-related Interaction Interface Pymol
e1gtvB1 B:x,y,z->B:-Y+1,-X+1,-Z+1/6 P-loop domains-related Interaction Interface Pymol
e1gtvB1 B:-Y+1,-X+1,-Z+1/6->B:x,y,z P-loop domains-related Interaction Interface Pymol
e1gtvA1 B:x,y,z->A:-Y+1,-X+1,-Z+1/6 P-loop domains-related Interaction Interface Pymol
e1gtvA1 B:x,y,z->A:X-Y,-Y,-Z P-loop domains-related Interaction Interface Pymol
e1gtvB1 B:x,y,z->B:X-Y,-Y,-Z P-loop domains-related Interaction Interface Pymol
e1gtvB1 B:X-Y,-Y,-Z->B:x,y,z P-loop domains-related Interaction Interface Pymol
e1gtvA1 B:X-Y,X,Z-1/6->A:x,y,z P-loop domains-related Interaction Interface Pymol
e1gtvB1 B:x,y,z->B:X-Y,X,Z-1/6 P-loop domains-related Interaction Interface Pymol
e1gtvB1 B:X-Y,X,Z-1/6->B:x,y,z P-loop domains-related Interaction Interface Pymol
e1gtvA1 B:x,y,z->A:X-Y,X,Z-1/6 P-loop domains-related Interaction Interface Pymol
e1gtvB1 B:x,y,z->B:-X+Y+1,Y,-Z+1/2 P-loop domains-related Interaction Interface Pymol
e1gtvB1 B:-X+Y+1,Y,-Z+1/2->B:x,y,z P-loop domains-related Interaction Interface Pymol
e1gtvA1 B:x,y,z->A:-X+Y+1,Y,-Z+1/2 P-loop domains-related Interaction Interface Pymol
e1gtvB1 B:x,y,z->B:X,X-Y,-Z-1/6 P-loop domains-related Interaction Interface Pymol
e1gtvB1 B:X,X-Y,-Z-1/6->B:x,y,z P-loop domains-related Interaction Interface Pymol