Domain ID e1gxmA1

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  • A: alpha superhelices
  • X: Repetitive alpha hairpins
  • H: alpha/alpha toroid
  • T: alpha/alpha toroid
  • F: Pec_lyase
UID: 000004509
Type: Manual and representative domain
Range: A:326-649
Ligands: GOL
PDB: 1gxm
PDB Description: PECTATE LYASE
UniProt: Q9F7L3
Species: Cellvibrio japonicus

Structure of domain e1gxmA1

Structural contacts of domain e1gxmA1 of H-group "alpha/alpha toroid":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e1gxmB1 A:X,Y,Z->B:x,y,z alpha/alpha toroid Interaction Interface Pymol
e1gxmB1 A:x,y,z->B:-X+1,Y-1/2,-Z+1 alpha/alpha toroid Interaction Interface Pymol
e1gxmB1 A:x,y,z->B:-X+1,Y-1/2,-Z+2 alpha/alpha toroid Interaction Interface Pymol
e1gxmB1 A:X,Y,Z-1->B:x,y,z alpha/alpha toroid Interaction Interface Pymol
e1gxmA1 A:x,y,z->A:X-1,Y,Z alpha/alpha toroid Interaction Interface Pymol
e1gxmA1 A:X-1,Y,Z->A:x,y,z alpha/alpha toroid Interaction Interface Pymol
e1gxmB1 A:x,y,z->B:-X+2,Y-1/2,-Z+1 alpha/alpha toroid Interaction Interface Pymol
e1gxmB1 A:x,y,z->B:-X+2,Y-1/2,-Z+2 alpha/alpha toroid Interaction Interface Pymol
e1gxmA1 A:x,y,z->A:-X+1,Y-1/2,-Z+2 alpha/alpha toroid Interaction Interface Pymol
e1gxmA1 A:-X+1,Y-1/2,-Z+2->A:x,y,z alpha/alpha toroid Interaction Interface Pymol