ECOD: domain e1i1rB1

Domain ID e1i1rB1

A: alpha bundles
X: Ferritin/Heme oxygenase/4-helical cytokines
H: 4-helical cytokines
T: 4-helical cytokines
F: IL6

UID:	000003993
Type:	Manual and representative domain
Range:	B:6-172
PDB:	1i1r
PDB Description:	VIRAL IL-6
UniProt:	Q98823
Hsap BLAST neighbor:	P05231
Species:	Human herpesvirus 8

Domains in the same chain:

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e1i1rB1	B:6-172	Ferritin/Heme oxygenase/4-helical cytokines	4-helical cytokines	4-helical cytokines

Domains in the same PDB:

e1i1rA3	A:2-101	Immunoglobulin-like beta-sandwich	Immunoglobulin-related	Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e1i1rA1	A:102-195	Immunoglobulin-like beta-sandwich	Immunoglobulin-related	Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e1i1rA2	A:197-302	Immunoglobulin-like beta-sandwich	Immunoglobulin-related	Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e1i1rB1	B:6-172	Ferritin/Heme oxygenase/4-helical cytokines	4-helical cytokines	4-helical cytokines

Structural contacts of domain e1i1rB1 of H-group "4-helical cytokines":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e1i1rA3	B:x,y,z->A:-X+1,Y,-Z+1	Immunoglobulin-related	Interaction Interface Pymol
e1i1rA2	B:x,y,z->A:X,Y,Z	Immunoglobulin-related	Interaction Interface Pymol
e1i1rA1	B:x,y,z->A:X,Y,Z	Immunoglobulin-related	Interaction Interface Pymol
e1i1rA3	B:x,y,z->A:X-1,Y,Z-1	Immunoglobulin-related	Interaction Interface Pymol