| UID: | 000006962 |
|---|---|
| Type: | Manual and representative domain |
| Range: | A:1-105 |
| PDB: | 1ipa |
| PDB Description: | RNA 2'-O-RIBOSE METHYLTRANSFERASE |
| UniProt: | Q7SID4 |
| Species: | Thermus thermophilus |
Structure of domain e1ipaA1
Domains in the same chain:
| e1ipaA1 | A:1-105 | Bacillus chorismate mutase-like | L30e-like | L30e-like |
| e1ipaA2 | A:106-263 | alpha/beta knot | alpha/beta knot | alpha/beta knot |
Domains in the same PDB:
| e1ipaA1 | A:1-105 | Bacillus chorismate mutase-like | L30e-like | L30e-like |
| e1ipaA2 | A:106-263 | alpha/beta knot | alpha/beta knot | alpha/beta knot |
Structural contacts of domain e1ipaA1 of H-group "L30e-like":
The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.
| Domain ID | Symmetry operator | H-group | Visualization |
|---|---|---|---|
| e1ipaA2 | A:x,y,z->A:Y,X,-Z | alpha/beta knot | Interaction Interface Pymol |
| e1ipaA2 | A:Y,X,-Z->A:x,y,z | alpha/beta knot | Interaction Interface Pymol |
| e1ipaA2 | A:-Y+1/2,X-1/2,Z-1/4->A:x,y,z | alpha/beta knot | Interaction Interface Pymol |
| e1ipaA1 | A:x,y,z->A:X-1/2,-Y+1/2,-Z+1/4 | L30e-like | Interaction Interface Pymol |
| e1ipaA2 | A:X-1/2,-Y+1/2,-Z+1/4->A:x,y,z | alpha/beta knot | Interaction Interface Pymol |
| e1ipaA1 | A:X-1/2,-Y+1/2,-Z+1/4->A:x,y,z | L30e-like | Interaction Interface Pymol |
| e1ipaA2 | A:X,Y-1,Z->A:x,y,z | alpha/beta knot | Interaction Interface Pymol |
