| UID: | 000008980 |
|---|---|
| Type: | Manual and representative domain |
| Range: | A:6-360 |
| Ligands: | ZN |
| PDB: | 1iq8 |
| PDB Description: | ARCHAEOSINE TRNA-GUANINE TRANSGLYCOSYLASE |
| UniProt: | O58843 |
| Hsap BLAST neighbor: | Q9BXR0 |
| Species: | Pyrococcus horikoshii |
Structure of domain e1iq8A3
Domains in the same chain:
| e1iq8A3 | A:6-360 | TIM beta/alpha-barrel | TIM barrels | TIM barrels |
| e1iq8A2 | A:361-505 | Cystatin-like | Pre-PUA domain | Pre-PUA domain |
| e1iq8A1 | A:506-582 | cradle loop barrel | RIFT-related | PUA domain |
Domains in the same PDB:
| e1iq8A3 | A:6-360 | TIM beta/alpha-barrel | TIM barrels | TIM barrels |
| e1iq8A2 | A:361-505 | Cystatin-like | Pre-PUA domain | Pre-PUA domain |
| e1iq8A1 | A:506-582 | cradle loop barrel | RIFT-related | PUA domain |
| e1iq8B3 | B:6-360 | TIM beta/alpha-barrel | TIM barrels | TIM barrels |
| e1iq8B2 | B:361-505 | Cystatin-like | Pre-PUA domain | Pre-PUA domain |
| e1iq8B1 | B:506-582 | cradle loop barrel | RIFT-related | PUA domain |
Structural contacts of domain e1iq8A3 of H-group "TIM barrels":
The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.
| Domain ID | Symmetry operator | H-group | Visualization |
|---|---|---|---|
| e1iq8B2 | A:X,Y,Z->B:x,y,z | Pre-PUA domain | Interaction Interface Pymol |
| e1iq8B3 | A:X,Y,Z->B:x,y,z | TIM barrels | Interaction Interface Pymol |
| e1iq8A3 | A:x,y,z->A:-Y+1,-X+1,-Z+1/2 | TIM barrels | Interaction Interface Pymol |
| e1iq8A3 | A:-Y+1,-X+1,-Z+1/2->A:x,y,z | TIM barrels | Interaction Interface Pymol |
| e1iq8B3 | A:X-1/2,-Y+3/2,-Z+1/4->B:x,y,z | TIM barrels | Interaction Interface Pymol |
| e1iq8A2 | A:-Y,-X+1,-Z+1/2->A:x,y,z | Pre-PUA domain | Interaction Interface Pymol |
