ECOD: domain e1irxA4

Domain ID e1irxA4

A: few secondary structure elements
X: Rubredoxin-like
H: Rubredoxin-related
T: Rubredoxin-related
F: tRNA-synt_1f

UID:	001489659
Type:	Manual and representative domain
Range:	A:169-216
Ligands:	ZN
PDB:	1irx
PDB Description:	LYSYL-TRNA SYNTHETASE
UniProt:	O57963
Species:	Pyrococcus horikoshii

Domain
In chain context
In PDB context

Structure of domain e1irxA4

Domains in the same chain:

Download Pymol

e1irxA3	A:3-168,A:217-270	HUP domain-like	HUP domains	HUP domains
e1irxA4	A:169-216	Rubredoxin-like	Rubredoxin-related	Rubredoxin-related
e1irxA1	A:271-523	HTH	An anticodon-binding domain of class I aminoacyl-tRNA synthetases	An anticodon-binding domain of class I aminoacyl-tRNA synthetases

Domains in the same PDB:

Structural contacts of domain e1irxA4 of H-group "Rubredoxin-related":

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The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e1irxA4	A:-X+1,Y-1/2,-Z+1->B:x,y,z	Rubredoxin-related	Interaction Interface Pymol