Domain ID e1iv1D1

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  • A: a+b three layers
  • X: Bacillus chorismate mutase-like
  • H: 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase IspF
  • T: 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase IspF
  • F: YgbB
UID: 000079192
Type: Automatic domain
Parent: e1iv3A1
Range: D:402-551
PDB: 1iv1
PDB Description: 2-C-METHYL-D-ERYTHRITOL 2,4-CYCLODIPHOSPHATE SYNTHASE
UniProt: Q8RQP5
Species: Thermus thermophilus

Structure of domain e1iv1D1

Structural contacts of domain e1iv1D1 of H-group "2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase IspF":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e1iv1C1 D:x,y,z->C:X,Y,Z 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase IspF Interaction Interface Pymol
e1iv1A1 D:x,y,z->A:X,Y,Z 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase IspF Interaction Interface Pymol
e1iv1E1 D:X,Y-1,Z->E:x,y,z 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase IspF Interaction Interface Pymol
e1iv1F1 D:Y-1,X,-Z+1->F:x,y,z 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase IspF Interaction Interface Pymol
e1iv1E1 D:Y-1,X,-Z+1->E:x,y,z 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase IspF Interaction Interface Pymol
e1iv1E1 D:x,y,z->E:-Y,-X+1,-Z+1/2 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase IspF Interaction Interface Pymol
e1iv1D1 D:x,y,z->D:Y-1,X+1,-Z+1 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase IspF Interaction Interface Pymol
e1iv1D1 D:Y-1,X+1,-Z+1->D:x,y,z 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase IspF Interaction Interface Pymol
e1iv1A1 D:X-1/2,-Y+3/2,-Z+3/4->A:x,y,z 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase IspF Interaction Interface Pymol