Domain ID e1iv2F1

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  • A: a+b three layers
  • X: Bacillus chorismate mutase-like
  • H: 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase IspF
  • T: 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase IspF
  • F: YgbB
UID: 000079187
Type: Automatic domain
Parent: e1iv3A1
Range: F:1402-1551
Ligands: CDP MG
PDB: 1iv2
PDB Description: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase
UniProt: Q8RQP5
Species: Thermus thermophilus

Structure of domain e1iv2F1

Structural contacts of domain e1iv2F1 of H-group "2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase IspF":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e1iv2E1 F:x,y,z->E:X,Y,Z 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase IspF Interaction Interface Pymol
e1iv2D1 F:x,y,z->D:X,Y,Z 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase IspF Interaction Interface Pymol
e1iv2A1 F:x,y,z->A:-Y+1/2,X+1/2,Z+1/4 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase IspF Interaction Interface Pymol
e1iv2C1 F:x,y,z->C:Y-1,X,-Z+1 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase IspF Interaction Interface Pymol
e1iv2B1 F:x,y,z->B:Y-1,X,-Z+1 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase IspF Interaction Interface Pymol
e1iv2B1 F:x,y,z->B:X,Y,Z 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase IspF Interaction Interface Pymol
e1iv2E1 F:x,y,z->E:X-1/2,-Y+1/2,-Z+3/4 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase IspF Interaction Interface Pymol
e1iv2D1 F:x,y,z->D:-Y+1/2,X+1/2,Z+1/4 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase IspF Interaction Interface Pymol