ECOD: domain e1j6uA3

Domain ID e1j6uA3

A: a/b three-layered sandwiches
X: MurD-like peptide ligases, peptide-binding domain
H: MurD-like peptide ligases, peptide-binding domain
T: MurD-like peptide ligases, peptide-binding domain
F: Mur_ligase_C

UID:	000010628
Type:	Manual and representative domain
Range:	A:296-446
PDB:	1j6u
PDB Description:	UDP-N-acetylmuramate-alanine ligase MurC
UniProt:	Q9WY73
Species:	Thermotoga maritima

Domains in the same chain:

Download Pymol

e1j6uA1	A:0-88	Rossmann-like	Rossmann-related	MurCD/PglD N-terminal domain-like
e1j6uA2	A:89-295	P-loop domains-like	P-loop domains-related	P-loop containing nucleoside triphosphate hydrolases
e1j6uA3	A:296-446	MurD-like peptide ligases, peptide-binding domain	MurD-like peptide ligases, peptide-binding domain	MurD-like peptide ligases, peptide-binding domain

Domains in the same PDB:

e1j6uA1	A:0-88	Rossmann-like	Rossmann-related	MurCD/PglD N-terminal domain-like
e1j6uA2	A:89-295	P-loop domains-like	P-loop domains-related	P-loop containing nucleoside triphosphate hydrolases
e1j6uA3	A:296-446	MurD-like peptide ligases, peptide-binding domain	MurD-like peptide ligases, peptide-binding domain	MurD-like peptide ligases, peptide-binding domain

Structural contacts of domain e1j6uA3 of H-group "MurD-like peptide ligases, peptide-binding domain":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e1j6uA1	A:x,y,z->A:Z,X-1,Y+1	Rossmann-related	Interaction Interface Pymol
e1j6uA3	A:x,y,z->A:-X+7/4,Z-3/4,Y+3/4	MurD-like peptide ligases, peptide-binding domain	Interaction Interface Pymol
e1j6uA2	A:x,y,z->A:-X+7/4,Z-3/4,Y+3/4	P-loop domains-related	Interaction Interface Pymol
e1j6uA3	A:-X+7/4,Z-3/4,Y+3/4->A:x,y,z	MurD-like peptide ligases, peptide-binding domain	Interaction Interface Pymol
e1j6uA2	A:-X+7/4,Z-3/4,Y+3/4->A:x,y,z	P-loop domains-related	Interaction Interface Pymol