ECOD: domain e1j8hA2

Domain ID e1j8hA2

A: a+b two layers
X: MHC antigen-recognition domain
H: MHC antigen-recognition domain
T: MHC antigen-recognition domain
F: MHC_II_alpha

UID:	000075373
Type:	Automatic domain
Parent:	e1hdmA2
Range:	A:2-81
Ligands:	NAG
PDB:	1j8h
PDB Description:	HLA CLASS II HISTOCOMPATIBILITY ANTIGEN, DR ALPHA CHAIN
UniProt:	P01903
Hsap BLAST neighbor:	P01903
Species:	Homo sapiens

Domains in the same chain:

Download Pymol

e1j8hA2	A:2-81	MHC antigen-recognition domain	MHC antigen-recognition domain	MHC antigen-recognition domain
e1j8hA1	A:82-180	Immunoglobulin-like beta-sandwich	Immunoglobulin-related	Immunoglobulin/Fibronectin type III/E set domains/PapD-like

Domains in the same PDB:

e1j8hA2	A:2-81	MHC antigen-recognition domain	MHC antigen-recognition domain	MHC antigen-recognition domain
e1j8hA1	A:82-180	Immunoglobulin-like beta-sandwich	Immunoglobulin-related	Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e1j8hB2	B:3-87	MHC antigen-recognition domain	MHC antigen-recognition domain	MHC antigen-recognition domain
e1j8hB1	B:95-190	Immunoglobulin-like beta-sandwich	Immunoglobulin-related	Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e1j8hD1	D:1-117	Immunoglobulin-like beta-sandwich	Immunoglobulin-related	Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e1j8hD2	D:123-203	Immunoglobulin-like beta-sandwich	Immunoglobulin-related	Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e1j8hE1	E:3-118	Immunoglobulin-like beta-sandwich	Immunoglobulin-related	Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e1j8hE2	E:122-246	Immunoglobulin-like beta-sandwich	Immunoglobulin-related	Immunoglobulin/Fibronectin type III/E set domains/PapD-like

Structural contacts of domain e1j8hA2 of H-group "MHC antigen-recognition domain":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e1hdmA2	A:X,Y,Z->B:x,y,z	MHC antigen-recognition domain	Interaction Interface Pymol
e1j8hB1	A:X,Y,Z->B:x,y,z	Immunoglobulin-related	Interaction Interface Pymol
e1j8hE1	A:X,Y,Z->E:x,y,z	Immunoglobulin-related	Interaction Interface Pymol
e1j8hE1	A:-X+1,Y,-Z->E:x,y,z	Immunoglobulin-related	Interaction Interface Pymol
e1j8hD1	A:X,Y,Z->D:x,y,z	Immunoglobulin-related	Interaction Interface Pymol