Domain ID e1jduB1

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  • A: a/b three-layered sandwiches
  • X: Phosphorylase/hydrolase-like
  • H: Peptidyl-tRNA hydrolase-like
  • T: Peptidyl-tRNA hydrolase-like
  • F: PNP_UDP_1
UID: 000106113
Type: Automatic domain
Parent: e3pnpA1
Range: B:3-236
PDB: 1jdu
PDB Description: 5'-METHYLTHIOADENOSINE PHOSPHORYLASE
UniProt: P50389
Species: Sulfolobus solfataricus

Structure of domain e1jduB1

Structural contacts of domain e1jduB1 of H-group "Peptidyl-tRNA hydrolase-like":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e1jduC1 B:X,Y,Z->C:x,y,z Peptidyl-tRNA hydrolase-like Interaction Interface Pymol
e1jduB1 B:x,y,z->B:-X+1,Y,-Z+1/2 Peptidyl-tRNA hydrolase-like Interaction Interface Pymol
e1jduB1 B:-X+1,Y,-Z+1/2->B:x,y,z Peptidyl-tRNA hydrolase-like Interaction Interface Pymol
e1jduA1 B:x,y,z->A:-X+3/2,Y-1/2,-Z+1/2 Peptidyl-tRNA hydrolase-like Interaction Interface Pymol
e1jduC1 B:-X+1,Y,-Z+1/2->C:x,y,z Peptidyl-tRNA hydrolase-like Interaction Interface Pymol
e1jduA1 B:x,y,z->A:X,Y,Z Peptidyl-tRNA hydrolase-like Interaction Interface Pymol