Domain ID e1ji2A3

Download files:
  • A: a/b barrels
  • X: TIM beta/alpha-barrel
  • H: TIM barrels
  • T: TIM barrels
  • F: Alpha-amylase
UID: 000094376
Type: Automatic domain
Parent: e1e43A2
Range: A:121-502
Ligands: CA
PDB: 1ji2
PDB Description: ALPHA-AMYLASE II
UniProt: Q08751
Hsap BLAST neighbor: Q07837
Species: Thermoactinomyces vulgaris

Structure of domain e1ji2A3

Structural contacts of domain e1ji2A3 of H-group "TIM barrels":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e1ji2B3 A:X,Y,Z->B:x,y,z TIM barrels Interaction Interface Pymol
e1ji2B1 A:X,Y,Z->B:x,y,z Immunoglobulin-related Interaction Interface Pymol
e1ji2B3 A:x,y,z->B:X-1/2,-Y+1/2,-Z+1 TIM barrels Interaction Interface Pymol
e1ji2B2 A:x,y,z->B:X-1/2,-Y+1/2,-Z+1 Glycosyl hydrolase domain Interaction Interface Pymol
e1ji2B1 A:-X+1/2,-Y+1,Z-1/2->B:x,y,z Immunoglobulin-related Interaction Interface Pymol
e1ji2A1 A:-X+1/2,-Y+1,Z-1/2->A:x,y,z Immunoglobulin-related Interaction Interface Pymol
e1ji2A2 A:-X+1/2,-Y+1,Z-1/2->A:x,y,z Glycosyl hydrolase domain Interaction Interface Pymol
e1ji2A1 A:X-1/2,-Y+1/2,-Z+1->A:x,y,z Immunoglobulin-related Interaction Interface Pymol
e1ji2B3 A:X-1/2,-Y+1/2,-Z+1->B:x,y,z TIM barrels Interaction Interface Pymol