Domain ID e1jihB2

Download files:
  • A: a+b two layers
  • X: Reverse ferredoxin
  • H: Lesion bypass DNA polymerase (Y-family), little finger domain
  • T: Lesion bypass DNA polymerase (Y-family), little finger domain
  • F: IMS_C
UID: 000063409
Type: Automatic domain
Parent: e1jx4A2
Range: B:390-509
PDB: 1jih
PDB Description: DNA POLYMERASE ETA
UniProt: Q04049
Species: Saccharomyces cerevisiae

Structure of domain e1jihB2

Domains in the same chain:

Download Pymol

e1jihB3 B:1-43,B:127-296 Alpha-beta plaits Adenylyl and guanylyl cyclase catalytic domain-like Adenylyl and guanylyl cyclase catalytic domain-like
e1jihB4 B:44-126 Hypothetical protein Ta1206-like Hypothetical protein Ta1206-like Hypothetical protein Ta1206-like
e1jihB1 B:297-388 HhH/H2TH SAM/DNA-glycosylase SAM domain-like
e1jihB2 B:390-509 Reverse ferredoxin Lesion bypass DNA polymerase (Y-family), little finger domain Lesion bypass DNA polymerase (Y-family), little finger domain

Domains in the same PDB:

e1jihA3 A:1-44,A:128-297 Alpha-beta plaits Adenylyl and guanylyl cyclase catalytic domain-like Adenylyl and guanylyl cyclase catalytic domain-like
e1jihA4 A:45-127 Hypothetical protein Ta1206-like Hypothetical protein Ta1206-like Hypothetical protein Ta1206-like
e1jihA1 A:298-389 HhH/H2TH SAM/DNA-glycosylase SAM domain-like
e1jihA2 A:390-509 Reverse ferredoxin Lesion bypass DNA polymerase (Y-family), little finger domain Lesion bypass DNA polymerase (Y-family), little finger domain
e1jihB3 B:1-43,B:127-296 Alpha-beta plaits Adenylyl and guanylyl cyclase catalytic domain-like Adenylyl and guanylyl cyclase catalytic domain-like
e1jihB4 B:44-126 Hypothetical protein Ta1206-like Hypothetical protein Ta1206-like Hypothetical protein Ta1206-like
e1jihB1 B:297-388 HhH/H2TH SAM/DNA-glycosylase SAM domain-like
e1jihB2 B:390-509 Reverse ferredoxin Lesion bypass DNA polymerase (Y-family), little finger domain Lesion bypass DNA polymerase (Y-family), little finger domain

Structural contacts of domain e1jihB2 of H-group "Lesion bypass DNA polymerase (Y-family), little finger domain":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e1jihA3 B:x,y,z->A:X,Y,Z Adenylyl and guanylyl cyclase catalytic domain-like Interaction Interface Pymol
e1jihA3 B:-Y+1/2,X-1/2,Z+1/4->A:x,y,z Adenylyl and guanylyl cyclase catalytic domain-like Interaction Interface Pymol
e1jihA1 B:x,y,z->A:Y,X,-Z SAM/DNA-glycosylase Interaction Interface Pymol