Domain ID e1jiiA1

Download files:
  • A: a/b three-layered sandwiches
  • X: HUP domain-like
  • H: HUP domains
  • T: HUP domains
  • F: tRNA-synt_1b
UID: 000103057
Type: Automatic domain
Parent: e1jilA1
Range: A:2-320
Ligands: 383
PDB: 1jii
PDB Description: tyrosyl-tRNA synthetase
UniProt: A6QHR2
Hsap BLAST neighbor: Q9Y2Z4
Species: Staphylococcus aureus

Structure of domain e1jiiA1

Domains in the same chain:

e1jiiA1 A:2-320 HUP domain-like HUP domains HUP domains

Domains in the same PDB:

e1jiiA1 A:2-320 HUP domain-like HUP domains HUP domains

Structural contacts of domain e1jiiA1 of H-group "HUP domains":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e1jiiA1 A:x,y,z->A:X,-Y,-Z+1 HUP domains Interaction Interface Pymol
e1jiiA1 A:X,-Y,-Z+1->A:x,y,z HUP domains Interaction Interface Pymol
e1jiiA1 A:x,y,z->A:-X,Y,-Z+3/2 HUP domains Interaction Interface Pymol
e1jiiA1 A:-X,Y,-Z+3/2->A:x,y,z HUP domains Interaction Interface Pymol
e1jiiA1 A:x,y,z->A:-X-1/2,Y-1/2,-Z+3/2 HUP domains Interaction Interface Pymol
e1jiiA1 A:-X-1/2,Y-1/2,-Z+3/2->A:x,y,z HUP domains Interaction Interface Pymol