Domain ID e1jmuI1

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  • A: a+b complex topology
  • X: Outer capsid protein sigma 3-related
  • H: Outer capsid protein sigma 3-related
  • T: Outer capsid protein sigma 3-related
  • F: Reovirus_cap
UID: 000085700
Type: Automatic domain
Parent: e1fn9A1
Range: I:0-364
Ligands: SO4 ZN
PDB: 1jmu
PDB Description: SIGMA 3 PROTEIN
UniProt: P07939
Species: Reovirus sp.

Structure of domain e1jmuI1

Domains in the same chain:

e1jmuI1 I:0-364 Outer capsid protein sigma 3-related Outer capsid protein sigma 3-related Outer capsid protein sigma 3-related

Domains in the same PDB:

e1jmu.8 A:10-42,B:43-277 a+b domain in membrane penetration protein mu1 a+b domain in membrane penetration protein mu1 a+b domain in membrane penetration protein mu1
e1jmuB7 B:278-314,B:501-675 Alpha-helical domain in membrane penetration protein mu1 Alpha-helical domain in membrane penetration protein mu1 Alpha-helical domain in membrane penetration protein mu1
e1jmuB1 B:315-500 jelly-roll Jelly-roll domain in membrane penetration protein mu1 Jelly-roll domain in membrane penetration protein mu1
e1jmuC1 C:10-42 a+b domain in membrane penetration protein mu1 a+b domain in membrane penetration protein mu1 a+b domain in membrane penetration protein mu1
e1jmuD1 D:43-71,D:97-267 a+b domain in membrane penetration protein mu1 a+b domain in membrane penetration protein mu1 a+b domain in membrane penetration protein mu1
e1jmuD2 D:268-314,D:501-675 Alpha-helical domain in membrane penetration protein mu1 Alpha-helical domain in membrane penetration protein mu1 Alpha-helical domain in membrane penetration protein mu1
e1jmuD3 D:314-499 jelly-roll Jelly-roll domain in membrane penetration protein mu1 Jelly-roll domain in membrane penetration protein mu1
e1jmuE1 E:10-42 a+b domain in membrane penetration protein mu1 a+b domain in membrane penetration protein mu1 a+b domain in membrane penetration protein mu1
e1jmuF1 F:43-71,F:97-267 a+b domain in membrane penetration protein mu1 a+b domain in membrane penetration protein mu1 a+b domain in membrane penetration protein mu1
e1jmuF3 F:268-314,F:501-675 Alpha-helical domain in membrane penetration protein mu1 Alpha-helical domain in membrane penetration protein mu1 Alpha-helical domain in membrane penetration protein mu1
e1jmuF2 F:314-499 jelly-roll Jelly-roll domain in membrane penetration protein mu1 Jelly-roll domain in membrane penetration protein mu1
e1jmuG1 G:0-364 Outer capsid protein sigma 3-related Outer capsid protein sigma 3-related Outer capsid protein sigma 3-related
e1jmuH1 H:0-364 Outer capsid protein sigma 3-related Outer capsid protein sigma 3-related Outer capsid protein sigma 3-related
e1jmuI1 I:0-364 Outer capsid protein sigma 3-related Outer capsid protein sigma 3-related Outer capsid protein sigma 3-related

Structural contacts of domain e1jmuI1 of H-group "Outer capsid protein sigma 3-related":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e1jmuF3 I:x,y,z->F:X,Y,Z Alpha-helical domain in membrane penetration protein mu1 Interaction Interface Pymol
e1jmuF2 I:x,y,z->F:X,Y,Z Jelly-roll domain in membrane penetration protein mu1 Interaction Interface Pymol
e1jmuD3 I:x,y,z->D:X,Y,Z Jelly-roll domain in membrane penetration protein mu1 Interaction Interface Pymol
e1jmuD2 I:x,y,z->D:-X+1/2,Y-1/2,-Z+3/2 Alpha-helical domain in membrane penetration protein mu1 Interaction Interface Pymol
e1jmuH1 I:x,y,z->H:-X+1/2,Y-1/2,-Z+3/2 Outer capsid protein sigma 3-related Interaction Interface Pymol