Domain ID e1jnbH2

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  • A: beta barrels
  • X: Barrel domain in upper collar protein
  • H: Barrel domain in upper collar protein
  • T: Barrel domain in upper collar protein
  • F: Phage_connector
UID: 000471942
Type: Automatic domain
Parent: e1h5wA3
Range: H:61-129
PDB: 1jnb
PDB Description: UPPER COLLAR PROTEIN
UniProt: P04332
Species: Bacillus phage phi29

Structure of domain e1jnbH2

Domains in the same chain:

Download Pymol

e1jnbH1 H:11-60,H:130-285 Alpha-helical domain in upper collar protein Alpha-helical domain in upper collar protein Alpha-helical domain in upper collar protein
e1jnbH2 H:61-129 Barrel domain in upper collar protein Barrel domain in upper collar protein Barrel domain in upper collar protein

Domains in the same PDB:

e1jnbA1 A:11-60,A:130-285 Alpha-helical domain in upper collar protein Alpha-helical domain in upper collar protein Alpha-helical domain in upper collar protein
e1jnbA2 A:61-129 Barrel domain in upper collar protein Barrel domain in upper collar protein Barrel domain in upper collar protein
e1jnbB1 B:11-60,B:130-285 Alpha-helical domain in upper collar protein Alpha-helical domain in upper collar protein Alpha-helical domain in upper collar protein
e1jnbB2 B:61-129 Barrel domain in upper collar protein Barrel domain in upper collar protein Barrel domain in upper collar protein
e1jnbC1 C:11-60,C:130-285 Alpha-helical domain in upper collar protein Alpha-helical domain in upper collar protein Alpha-helical domain in upper collar protein
e1jnbC2 C:61-129 Barrel domain in upper collar protein Barrel domain in upper collar protein Barrel domain in upper collar protein
e1jnbD1 D:11-60,D:130-285 Alpha-helical domain in upper collar protein Alpha-helical domain in upper collar protein Alpha-helical domain in upper collar protein
e1jnbD2 D:61-129 Barrel domain in upper collar protein Barrel domain in upper collar protein Barrel domain in upper collar protein
e1jnbE1 E:11-60,E:130-285 Alpha-helical domain in upper collar protein Alpha-helical domain in upper collar protein Alpha-helical domain in upper collar protein
e1jnbE2 E:61-129 Barrel domain in upper collar protein Barrel domain in upper collar protein Barrel domain in upper collar protein
e1jnbF1 F:11-60,F:130-285 Alpha-helical domain in upper collar protein Alpha-helical domain in upper collar protein Alpha-helical domain in upper collar protein
e1jnbF2 F:61-129 Barrel domain in upper collar protein Barrel domain in upper collar protein Barrel domain in upper collar protein
e1jnbG1 G:11-60,G:130-285 Alpha-helical domain in upper collar protein Alpha-helical domain in upper collar protein Alpha-helical domain in upper collar protein
e1jnbG2 G:61-129 Barrel domain in upper collar protein Barrel domain in upper collar protein Barrel domain in upper collar protein
e1jnbH1 H:11-60,H:130-285 Alpha-helical domain in upper collar protein Alpha-helical domain in upper collar protein Alpha-helical domain in upper collar protein
e1jnbH2 H:61-129 Barrel domain in upper collar protein Barrel domain in upper collar protein Barrel domain in upper collar protein
e1jnbI1 I:11-60,I:130-285 Alpha-helical domain in upper collar protein Alpha-helical domain in upper collar protein Alpha-helical domain in upper collar protein
e1jnbI2 I:61-129 Barrel domain in upper collar protein Barrel domain in upper collar protein Barrel domain in upper collar protein
e1jnbJ1 J:11-60,J:130-285 Alpha-helical domain in upper collar protein Alpha-helical domain in upper collar protein Alpha-helical domain in upper collar protein
e1jnbJ2 J:61-129 Barrel domain in upper collar protein Barrel domain in upper collar protein Barrel domain in upper collar protein
e1jnbK1 K:11-60,K:130-285 Alpha-helical domain in upper collar protein Alpha-helical domain in upper collar protein Alpha-helical domain in upper collar protein
e1jnbK2 K:61-129 Barrel domain in upper collar protein Barrel domain in upper collar protein Barrel domain in upper collar protein
e1jnbL1 L:11-60,L:130-285 Alpha-helical domain in upper collar protein Alpha-helical domain in upper collar protein Alpha-helical domain in upper collar protein
e1jnbL2 L:61-129 Barrel domain in upper collar protein Barrel domain in upper collar protein Barrel domain in upper collar protein

Structural contacts of domain e1jnbH2 of H-group "Barrel domain in upper collar protein":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e1jnbI2 H:X,Y,Z->I:x,y,z Barrel domain in upper collar protein Interaction Interface Pymol
e1jnbI1 H:X,Y,Z->I:x,y,z Alpha-helical domain in upper collar protein Interaction Interface Pymol
e1jnbL1 H:-X+1/2,Y-1/2,-Z+2->L:x,y,z Alpha-helical domain in upper collar protein Interaction Interface Pymol