Domain ID e1jpnA2

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  • A: a/b three-layered sandwiches
  • X: P-loop domains-like
  • H: P-loop domains-related
  • T: P-loop containing nucleoside triphosphate hydrolases
  • F: SRP54
UID: 000102071
Type: Automatic domain
Parent: e1ls1A2
Range: A:89-295
Ligands: ACY GNP
PDB: 1jpn
PDB Description: SIGNAL RECOGNITION PARTICLE PROTEIN
UniProt: O07347
Hsap BLAST neighbor: P61011
Species: Thermus aquaticus

Structure of domain e1jpnA2

Structural contacts of domain e1jpnA2 of H-group "P-loop domains-related":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e1jpnA1 A:x,y,z->A:-X+1,Y,-Z Domain of the SRP/SRP receptor G-proteins Interaction Interface Pymol
e1jpnA2 A:x,y,z->A:-X+1,Y,-Z P-loop domains-related Interaction Interface Pymol
e1jpnA2 A:-X+1,Y,-Z->A:x,y,z P-loop domains-related Interaction Interface Pymol
e1jpnA1 A:-X+1,Y,-Z->A:x,y,z Domain of the SRP/SRP receptor G-proteins Interaction Interface Pymol
e1jpnB1 A:X,Y,Z->B:x,y,z Domain of the SRP/SRP receptor G-proteins Interaction Interface Pymol
e1jpnB1 A:X,Y-1,Z->B:x,y,z Domain of the SRP/SRP receptor G-proteins Interaction Interface Pymol
e1jpnA2 A:x,y,z->A:-X+3/2,Y-1/2,-Z P-loop domains-related Interaction Interface Pymol
e1jpnA2 A:-X+3/2,Y-1/2,-Z->A:x,y,z P-loop domains-related Interaction Interface Pymol
e1jpnB1 A:X-1/2,Y-1/2,Z->B:x,y,z Domain of the SRP/SRP receptor G-proteins Interaction Interface Pymol
e1jpnB1 A:-X+1,Y-1,-Z->B:x,y,z Domain of the SRP/SRP receptor G-proteins Interaction Interface Pymol
e1jpnB2 A:-X+1,Y-1,-Z+1->B:x,y,z P-loop domains-related Interaction Interface Pymol
e1jpnB1 A:-X+1,Y,-Z->B:x,y,z Domain of the SRP/SRP receptor G-proteins Interaction Interface Pymol
e1jpnB2 A:-X+1,Y,-Z+1->B:x,y,z P-loop domains-related Interaction Interface Pymol