Domain ID e1jr3E4

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  • A: a/b three-layered sandwiches
  • X: P-loop domains-like
  • H: P-loop domains-related
  • T: P-loop containing nucleoside triphosphate hydrolases
  • F: DNA_pol3_delta2
UID: 001643626
Type: Automatic domain
Parent: e1a5tA5
Range: E:1-165
Ligands: ZN
PDB: 1jr3
PDB Description: DNA polymerase III, delta' subunit
UniProt: P28631
Species: Escherichia coli

Structure of domain e1jr3E4

Domains in the same chain:

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e1jr3E4 E:1-165 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e1jr3E3 E:166-207 Histone-like Histone-related AAA+ ATPase lid domain
e1jr3E2 E:208-334 DNA polymerase III clamp loader subunits, C-terminal domain DNA polymerase III clamp loader subunits, C-terminal domain DNA polymerase III clamp loader subunits, C-terminal domain

Domains in the same PDB:

e1jr3A2 A:3-178 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e1jr3A3 A:177-243 Histone-like Histone-related AAA+ ATPase lid domain
e1jr3A1 A:243-368 DNA polymerase III clamp loader subunits, C-terminal domain DNA polymerase III clamp loader subunits, C-terminal domain DNA polymerase III clamp loader subunits, C-terminal domain
e1jr3B2 B:4-178 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e1jr3B3 B:177-243 Histone-like Histone-related AAA+ ATPase lid domain
e1jr3B1 B:243-368 DNA polymerase III clamp loader subunits, C-terminal domain DNA polymerase III clamp loader subunits, C-terminal domain DNA polymerase III clamp loader subunits, C-terminal domain
e1jr3C2 C:3-178 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e1jr3C3 C:177-243 Histone-like Histone-related AAA+ ATPase lid domain
e1jr3C1 C:243-368 DNA polymerase III clamp loader subunits, C-terminal domain DNA polymerase III clamp loader subunits, C-terminal domain DNA polymerase III clamp loader subunits, C-terminal domain
e1jr3D3 D:1-141 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e1jr3D2 D:142-210 Histone-like Histone-related AAA+ ATPase lid domain
e1jr3D1 D:212-338 DNA polymerase III clamp loader subunits, C-terminal domain DNA polymerase III clamp loader subunits, C-terminal domain DNA polymerase III clamp loader subunits, C-terminal domain
e1jr3E4 E:1-165 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e1jr3E3 E:166-207 Histone-like Histone-related AAA+ ATPase lid domain
e1jr3E2 E:208-334 DNA polymerase III clamp loader subunits, C-terminal domain DNA polymerase III clamp loader subunits, C-terminal domain DNA polymerase III clamp loader subunits, C-terminal domain

Structural contacts of domain e1jr3E4 of H-group "P-loop domains-related":

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The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e1jr3B3 E:x,y,z->B:X,Y,Z Histone-related Interaction Interface Pymol
e1jr3B3 E:x,y,z->B:X,Y,Z Histone-related Interaction Interface Pymol
e1jr3B1 E:x,y,z->B:X,Y,Z DNA polymerase III clamp loader subunits, C-terminal domain Interaction Interface Pymol
e1jr3C3 E:x,y,z->C:X,Y-1,Z Histone-related Interaction Interface Pymol
e1jr3C3 E:x,y,z->A:X,Y-1,Z Histone-related Interaction Interface Pymol