Domain ID e1jywD5

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  • A: a/b barrels
  • X: TIM beta/alpha-barrel
  • H: TIM barrels
  • T: TIM barrels
  • F: Glyco_hydro_2_C
UID: 000094726
Type: Automatic domain
Parent: e1jz8A5
Range: D:334-625
Ligands: 147 DMS MG NA
PDB: 1jyw
PDB Description: Beta-Galactosidase
UniProt: P00722
Hsap BLAST neighbor: P08236
Species: Escherichia coli

Structure of domain e1jywD5

Domains in the same chain:

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e1jywD1 D:13-219 jelly-roll Galactose-binding domain-like Galactose-binding domain-like
e1jywD2 D:220-333 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e1jywD5 D:334-625 TIM beta/alpha-barrel TIM barrels TIM barrels
e1jywD3 D:626-730 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e1jywD4 D:731-1023 Glycosyl hydrolase domain-like supersandwich supersandwich

Domains in the same PDB:

e1jywA1 A:13-219 jelly-roll Galactose-binding domain-like Galactose-binding domain-like
e1jywA2 A:220-333 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e1jywA5 A:334-625 TIM beta/alpha-barrel TIM barrels TIM barrels
e1jywA3 A:626-730 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e1jywA4 A:731-1023 Glycosyl hydrolase domain-like supersandwich supersandwich
e1jywB1 B:13-219 jelly-roll Galactose-binding domain-like Galactose-binding domain-like
e1jywB2 B:220-333 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e1jywB5 B:334-625 TIM beta/alpha-barrel TIM barrels TIM barrels
e1jywB3 B:626-730 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e1jywB4 B:731-1023 Glycosyl hydrolase domain-like supersandwich supersandwich
e1jywC1 C:13-219 jelly-roll Galactose-binding domain-like Galactose-binding domain-like
e1jywC2 C:220-333 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e1jywC5 C:334-625 TIM beta/alpha-barrel TIM barrels TIM barrels
e1jywC3 C:626-730 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e1jywC4 C:731-1023 Glycosyl hydrolase domain-like supersandwich supersandwich
e1jywD1 D:13-219 jelly-roll Galactose-binding domain-like Galactose-binding domain-like
e1jywD2 D:220-333 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e1jywD5 D:334-625 TIM beta/alpha-barrel TIM barrels TIM barrels
e1jywD3 D:626-730 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e1jywD4 D:731-1023 Glycosyl hydrolase domain-like supersandwich supersandwich

Structural contacts of domain e1jywD5 of H-group "TIM barrels":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e1jywA1 D:x,y,z->A:X,Y,Z Galactose-binding domain-like Interaction Interface Pymol
e1jywA5 D:x,y,z->A:X,Y,Z TIM barrels Interaction Interface Pymol
e1jywA2 D:x,y,z->A:X,Y,Z Immunoglobulin-related Interaction Interface Pymol
e1jywC5 D:x,y,z->C:X,Y,Z TIM barrels Interaction Interface Pymol