Domain ID e1jyxB5

Download files:
  • A: a/b barrels
  • X: TIM beta/alpha-barrel
  • H: TIM barrels
  • T: TIM barrels
  • F: Glyco_hydro_2_C
UID: 000094751
Type: Automatic domain
Parent: e1jz8A5
Range: B:334-625
Ligands: DMS IPT MG NA
PDB: 1jyx
PDB Description: BETA-GALACTOSIDASE
UniProt: P00722
Hsap BLAST neighbor: P08236
Species: Escherichia coli

Structure of domain e1jyxB5

Domains in the same chain:

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e1jyxB1 B:13-219 jelly-roll Galactose-binding domain-like Galactose-binding domain-like
e1jyxB2 B:220-333 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e1jyxB5 B:334-625 TIM beta/alpha-barrel TIM barrels TIM barrels
e1jyxB3 B:626-730 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e1jyxB4 B:731-1023 Glycosyl hydrolase domain-like supersandwich supersandwich

Domains in the same PDB:

e1jyxA1 A:13-219 jelly-roll Galactose-binding domain-like Galactose-binding domain-like
e1jyxA2 A:220-333 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e1jyxA5 A:334-625 TIM beta/alpha-barrel TIM barrels TIM barrels
e1jyxA3 A:626-730 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e1jyxA4 A:731-1023 Glycosyl hydrolase domain-like supersandwich supersandwich
e1jyxB1 B:13-219 jelly-roll Galactose-binding domain-like Galactose-binding domain-like
e1jyxB2 B:220-333 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e1jyxB5 B:334-625 TIM beta/alpha-barrel TIM barrels TIM barrels
e1jyxB3 B:626-730 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e1jyxB4 B:731-1023 Glycosyl hydrolase domain-like supersandwich supersandwich
e1jyxC1 C:13-219 jelly-roll Galactose-binding domain-like Galactose-binding domain-like
e1jyxC2 C:220-333 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e1jyxC5 C:334-625 TIM beta/alpha-barrel TIM barrels TIM barrels
e1jyxC3 C:626-730 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e1jyxC4 C:731-1023 Glycosyl hydrolase domain-like supersandwich supersandwich
e1jyxD1 D:13-219 jelly-roll Galactose-binding domain-like Galactose-binding domain-like
e1jyxD2 D:220-333 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e1jyxD5 D:334-625 TIM beta/alpha-barrel TIM barrels TIM barrels
e1jyxD3 D:626-730 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e1jyxD4 D:731-1023 Glycosyl hydrolase domain-like supersandwich supersandwich

Structural contacts of domain e1jyxB5 of H-group "TIM barrels":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e1jyxC1 B:X,Y,Z->C:x,y,z Galactose-binding domain-like Interaction Interface Pymol
e1jyxC2 B:X,Y,Z->C:x,y,z Immunoglobulin-related Interaction Interface Pymol
e1jyxC5 B:X,Y,Z->C:x,y,z TIM barrels Interaction Interface Pymol
e1jyxA5 B:x,y,z->A:X,Y,Z TIM barrels Interaction Interface Pymol
e1jyxC4 B:x,y,z->C:X-1/2,-Y+1/2,-Z supersandwich Interaction Interface Pymol
e1jyxC5 B:x,y,z->C:X-1/2,-Y+1/2,-Z TIM barrels Interaction Interface Pymol