Domain ID e1jz8D5

Download files:
  • A: a/b barrels
  • X: TIM beta/alpha-barrel
  • H: TIM barrels
  • T: TIM barrels
  • F: Glyco_hydro_2_C
UID: 000094737
Type: Automatic domain
Parent: e1jz8A5
Range: D:334-625
Ligands: DMS LAK MG NA
PDB: 1jz8
PDB Description: Beta-Galactosidase
UniProt: P00722
Hsap BLAST neighbor: P08236
Species: Escherichia coli

Structure of domain e1jz8D5

Domains in the same chain:

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e1jz8D1 D:13-219 jelly-roll Galactose-binding domain-like Galactose-binding domain-like
e1jz8D2 D:220-333 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e1jz8D5 D:334-625 TIM beta/alpha-barrel TIM barrels TIM barrels
e1jz8D3 D:626-730 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e1jz8D4 D:731-1023 Glycosyl hydrolase domain-like supersandwich supersandwich

Domains in the same PDB:

e1jz8A1 A:13-219 jelly-roll Galactose-binding domain-like Galactose-binding domain-like
e1jz8A2 A:220-333 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e1jz8A5 A:334-625 TIM beta/alpha-barrel TIM barrels TIM barrels
e1jz8A3 A:626-730 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e1jz8A4 A:731-1023 Glycosyl hydrolase domain-like supersandwich supersandwich
e1jz8B1 B:13-219 jelly-roll Galactose-binding domain-like Galactose-binding domain-like
e1jz8B2 B:220-333 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e1jz8B5 B:334-625 TIM beta/alpha-barrel TIM barrels TIM barrels
e1jz8B3 B:626-730 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e1jz8B4 B:731-1023 Glycosyl hydrolase domain-like supersandwich supersandwich
e1jz8C1 C:13-219 jelly-roll Galactose-binding domain-like Galactose-binding domain-like
e1jz8C2 C:220-333 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e1jz8C5 C:334-625 TIM beta/alpha-barrel TIM barrels TIM barrels
e1jz8C3 C:626-730 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e1jz8C4 C:731-1023 Glycosyl hydrolase domain-like supersandwich supersandwich
e1jz8D1 D:13-219 jelly-roll Galactose-binding domain-like Galactose-binding domain-like
e1jz8D2 D:220-333 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e1jz8D5 D:334-625 TIM beta/alpha-barrel TIM barrels TIM barrels
e1jz8D3 D:626-730 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e1jz8D4 D:731-1023 Glycosyl hydrolase domain-like supersandwich supersandwich

Structural contacts of domain e1jz8D5 of H-group "TIM barrels":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e1jz8A5 D:x,y,z->A:X,Y,Z TIM barrels Interaction Interface Pymol
e1jz8A1 D:x,y,z->A:X,Y,Z Galactose-binding domain-like Interaction Interface Pymol
e1jz8A2 D:x,y,z->A:X,Y,Z Immunoglobulin-related Interaction Interface Pymol
e1jz8C5 D:x,y,z->C:X,Y,Z TIM barrels Interaction Interface Pymol