Domain ID e1k1dD2

Download files:
  • A: a/b barrels
  • X: TIM beta/alpha-barrel
  • H: TIM barrels
  • T: TIM barrels
  • F: Amidohydro_1
UID: 000095725
Type: Automatic domain
Parent: e1gkpA2
Range: D:53-384
Ligands: ZN
PDB: 1k1d
PDB Description: D-HYDANTOINASE
UniProt: Q45515
Hsap BLAST neighbor: Q14117
Species: Geobacillus stearothermophilus

Structure of domain e1k1dD2

Domains in the same chain:

e1k1dD1 D:2-52,D:385-460 Composite domain of metallo-dependent hydrolases Composite domain of metallo-dependent hydrolases Composite domain of metallo-dependent hydrolases
e1k1dD2 D:53-384 TIM beta/alpha-barrel TIM barrels TIM barrels

Domains in the same PDB:

e1k1dA1 A:2-52,A:385-460 Composite domain of metallo-dependent hydrolases Composite domain of metallo-dependent hydrolases Composite domain of metallo-dependent hydrolases
e1k1dA2 A:53-384 TIM beta/alpha-barrel TIM barrels TIM barrels
e1k1dB1 B:2-52,B:385-460 Composite domain of metallo-dependent hydrolases Composite domain of metallo-dependent hydrolases Composite domain of metallo-dependent hydrolases
e1k1dB2 B:53-384 TIM beta/alpha-barrel TIM barrels TIM barrels
e1k1dC1 C:2-52,C:385-460 Composite domain of metallo-dependent hydrolases Composite domain of metallo-dependent hydrolases Composite domain of metallo-dependent hydrolases
e1k1dC2 C:53-384 TIM beta/alpha-barrel TIM barrels TIM barrels
e1k1dD1 D:2-52,D:385-460 Composite domain of metallo-dependent hydrolases Composite domain of metallo-dependent hydrolases Composite domain of metallo-dependent hydrolases
e1k1dD2 D:53-384 TIM beta/alpha-barrel TIM barrels TIM barrels
e1k1dE1 E:2-52,E:385-460 Composite domain of metallo-dependent hydrolases Composite domain of metallo-dependent hydrolases Composite domain of metallo-dependent hydrolases
e1k1dE2 E:53-384 TIM beta/alpha-barrel TIM barrels TIM barrels
e1k1dF1 F:2-52,F:385-460 Composite domain of metallo-dependent hydrolases Composite domain of metallo-dependent hydrolases Composite domain of metallo-dependent hydrolases
e1k1dF2 F:53-384 TIM beta/alpha-barrel TIM barrels TIM barrels
e1k1dG1 G:2-52,G:385-460 Composite domain of metallo-dependent hydrolases Composite domain of metallo-dependent hydrolases Composite domain of metallo-dependent hydrolases
e1k1dG2 G:53-384 TIM beta/alpha-barrel TIM barrels TIM barrels
e1k1dH1 H:2-52,H:385-460 Composite domain of metallo-dependent hydrolases Composite domain of metallo-dependent hydrolases Composite domain of metallo-dependent hydrolases
e1k1dH2 H:53-384 TIM beta/alpha-barrel TIM barrels TIM barrels

Structural contacts of domain e1k1dD2 of H-group "TIM barrels":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e1k1dC2 D:x,y,z->C:X,Y,Z TIM barrels Interaction Interface Pymol
e1k1dC1 D:x,y,z->C:X,Y,Z Composite domain of metallo-dependent hydrolases Interaction Interface Pymol
e1k1dE2 D:X,Y,Z->E:x,y,z TIM barrels Interaction Interface Pymol
e1k1dA2 D:x,y,z->A:X,Y,Z TIM barrels Interaction Interface Pymol
e1k1dA1 D:x,y,z->A:X,Y,Z Composite domain of metallo-dependent hydrolases Interaction Interface Pymol
e1k1dA2 D:x,y,z->A:-X+1,Y,-Z+1 TIM barrels Interaction Interface Pymol