Domain ID e1k1tB1

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  • A: beta barrels
  • X: cradle loop barrel
  • H: RIFT-related
  • T: acid protease
  • F: RVP
UID: 000020455
Type: Automatic domain
Range: B:101-199
Ligands: 0Q4 SO4
PDB: 1k1t
PDB Description: PROTEASE RETROPEPSIN
UniProt: P04587
Species: Human immunodeficiency virus 1

Structure of domain e1k1tB1

Structural contacts of domain e1k1tB1 of H-group "RIFT-related":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e1k1tA1 B:x,y,z->A:X,Y,Z RIFT-related Interaction Interface Pymol
e1k1tA1 B:X-1,Y,Z->A:x,y,z RIFT-related Interaction Interface Pymol
e1k1tA1 B:x,y,z->A:-X+1,Y-1/2,-Z+1/2 RIFT-related Interaction Interface Pymol
e1k1tA1 B:x,y,z->A:-X+1/2,-Y+1,Z-1/2 RIFT-related Interaction Interface Pymol
e1k1tB1 B:x,y,z->B:-X+3/2,-Y+1,Z-1/2 RIFT-related Interaction Interface Pymol
e1k1tB1 B:-X+3/2,-Y+1,Z-1/2->B:x,y,z RIFT-related Interaction Interface Pymol
e1k1tA1 B:-X+1/2,-Y+1,Z-1/2->A:x,y,z RIFT-related Interaction Interface Pymol
e1k1tA1 B:-X+1,Y-1/2,-Z+1/2->A:x,y,z RIFT-related Interaction Interface Pymol