Domain ID e1k2bA1

Download files:
  • A: beta barrels
  • X: cradle loop barrel
  • H: RIFT-related
  • T: acid protease
  • F: RVP
UID: 000020336
Type: Automatic domain
Range: A:1-99
Ligands: 0Q4
PDB: 1k2b
PDB Description: PROTEASE RETROPEPSIN
UniProt: P04587
Species: Human immunodeficiency virus 1

Structure of domain e1k2bA1

Structural contacts of domain e1k2bA1 of H-group "RIFT-related":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e1k2bB1 A:X,Y,Z->B:x,y,z RIFT-related Interaction Interface Pymol
e1k2bB1 A:x,y,z->B:X-1,Y,Z RIFT-related Interaction Interface Pymol
e1k2bB1 A:-X+1,Y-1/2,-Z+1/2->B:x,y,z RIFT-related Interaction Interface Pymol
e1k2bB1 A:-X+1/2,-Y+1,Z-1/2->B:x,y,z RIFT-related Interaction Interface Pymol
e1k2bB1 A:x,y,z->B:-X+1/2,-Y+1,Z-1/2 RIFT-related Interaction Interface Pymol
e1k2bB1 A:x,y,z->B:-X+1,Y-1/2,-Z+1/2 RIFT-related Interaction Interface Pymol
e1k2bA1 A:x,y,z->A:-X,Y-1/2,-Z+1/2 RIFT-related Interaction Interface Pymol
e1k2bA1 A:-X,Y-1/2,-Z+1/2->A:x,y,z RIFT-related Interaction Interface Pymol
e1k2bA1 A:x,y,z->A:-X+1/2,-Y+1,Z-1/2 RIFT-related Interaction Interface Pymol
e1k2bA1 A:-X+1/2,-Y+1,Z-1/2->A:x,y,z RIFT-related Interaction Interface Pymol
e1k2bA1 A:x,y,z->A:-X+1,Y-1/2,-Z+1/2 RIFT-related Interaction Interface Pymol
e1k2bA1 A:-X+1,Y-1/2,-Z+1/2->A:x,y,z RIFT-related Interaction Interface Pymol