ECOD: domain e1k4sA1

Domain ID e1k4sA1

A: beta complex topology
X: Beta-strand domain in eukaryotic DNA topoisomerase I, N-terminal DNA-binding fragment
H: Beta-strand domain in eukaryotic DNA topoisomerase I, N-terminal DNA-binding fragment
T: Beta-strand domain in eukaryotic DNA topoisomerase I, N-terminal DNA-binding fragment
F: Topoisom_I_N

UID:	000044277
Type:	Automatic domain
Parent:	e1oisA1
Range:	A:213-229,A:320-430
PDB:	1k4s
PDB Description:	DNA TOPOISOMERASE I
UniProt:	P11387
Hsap BLAST neighbor:	P11387
Species:	Homo sapiens

Domain
In chain context
In PDB context

Structure of domain e1k4sA1

Domains in the same chain:

Download Pymol

e1k4sA1	A:213-229,A:320-430	Beta-strand domain in eukaryotic DNA topoisomerase I, N-terminal DNA-binding fragment	Beta-strand domain in eukaryotic DNA topoisomerase I, N-terminal DNA-binding fragment	Beta-strand domain in eukaryotic DNA topoisomerase I, N-terminal DNA-binding fragment
e1k4sA4	A:230-318	Alpha-helical domain in eukaryotic DNA topoisomerase I, N-terminal DNA-binding fragment	Alpha-helical domain in eukaryotic DNA topoisomerase I, N-terminal DNA-binding fragment	Alpha-helical domain in eukaryotic DNA topoisomerase I, N-terminal DNA-binding fragment
e1k4sA2	A:431-583	HTH	HTH	DNA breaking-rejoining enzymes
e1k4sA3	A:584-632,A:708-764	HTH	HTH	DNA breaking-rejoining enzymes

Domains in the same PDB:

e1k4sA1	A:213-229,A:320-430	Beta-strand domain in eukaryotic DNA topoisomerase I, N-terminal DNA-binding fragment	Beta-strand domain in eukaryotic DNA topoisomerase I, N-terminal DNA-binding fragment	Beta-strand domain in eukaryotic DNA topoisomerase I, N-terminal DNA-binding fragment
e1k4sA4	A:230-318	Alpha-helical domain in eukaryotic DNA topoisomerase I, N-terminal DNA-binding fragment	Alpha-helical domain in eukaryotic DNA topoisomerase I, N-terminal DNA-binding fragment	Alpha-helical domain in eukaryotic DNA topoisomerase I, N-terminal DNA-binding fragment
e1k4sA2	A:431-583	HTH	HTH	DNA breaking-rejoining enzymes
e1k4sA3	A:584-632,A:708-764	HTH	HTH	DNA breaking-rejoining enzymes

Structural contacts of domain e1k4sA1 of H-group "Beta-strand domain in eukaryotic DNA topoisomerase I, N-terminal DNA-binding fragment":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e1k4sA2	A:x,y,z->A:-Y+1,X-Y-1,Z-1/3	HTH	Interaction Interface Pymol