ECOD: domain e1k5dJ2

Domain ID e1k5dJ2

A: a/b three-layered sandwiches
X: P-loop domains-like
H: P-loop domains-related
T: P-loop containing nucleoside triphosphate hydrolases
F: Ras

UID:	001408172
Type:	Automatic domain
Parent:	e1mh1A1
Range:	J:8-213
Ligands:	GNP MG
PDB:	1k5d
PDB Description:	GTP-BINDING NUCLEAR PROTEIN RAN
UniProt:	P62826
Hsap BLAST neighbor:	P62826
Species:	Homo sapiens

Domain
In chain context
In PDB context

Structure of domain e1k5dJ2

Domains in the same chain:

Download Pymol

e1k5dJ2	J:8-213	P-loop domains-like	P-loop domains-related	P-loop containing nucleoside triphosphate hydrolases

Domains in the same PDB:

e1k5dA2	A:8-213	P-loop domains-like	P-loop domains-related	P-loop containing nucleoside triphosphate hydrolases
e1k5dB1	B:22-167	PH domain-like	PH domain-like	PH domain-like
e1k5dC1	C:2-345	Single-stranded right-handed beta-helix	Leucine-rich repeats	Leucine-rich repeats
e1k5dD2	D:8-213	P-loop domains-like	P-loop domains-related	P-loop containing nucleoside triphosphate hydrolases
e1k5dE1	E:22-167	PH domain-like	PH domain-like	PH domain-like
e1k5dF1	F:2-345	Single-stranded right-handed beta-helix	Leucine-rich repeats	Leucine-rich repeats
e1k5dG2	G:8-213	P-loop domains-like	P-loop domains-related	P-loop containing nucleoside triphosphate hydrolases
e1k5dH1	H:22-167	PH domain-like	PH domain-like	PH domain-like
e1k5dI1	I:2-345	Single-stranded right-handed beta-helix	Leucine-rich repeats	Leucine-rich repeats
e1k5dJ2	J:8-213	P-loop domains-like	P-loop domains-related	P-loop containing nucleoside triphosphate hydrolases
e1k5dK1	K:22-167	PH domain-like	PH domain-like	PH domain-like
e1k5dL1	L:2-345	Single-stranded right-handed beta-helix	Leucine-rich repeats	Leucine-rich repeats

Structural contacts of domain e1k5dJ2 of H-group "P-loop domains-related":

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The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e1k5dK1	J:X,Y,Z->K:x,y,z	PH domain-like	Interaction Interface Pymol
e1k5dL1	J:X,Y,Z->L:x,y,z	Leucine-rich repeats	Interaction Interface Pymol
e1k5dC1	J:X,Y,Z->C:x,y,z	Leucine-rich repeats	Interaction Interface Pymol
e1k5dD2	J:x,y,z->D:X,Y-1,Z	P-loop domains-related	Interaction Interface Pymol
e1k5dE1	J:x,y,z->E:X,Y-1,Z	PH domain-like	Interaction Interface Pymol
e1k5dI1	J:x,y,z->I:X,Y-1,Z	Leucine-rich repeats	Interaction Interface Pymol