ECOD: domain e1k5nA2

Domain ID e1k5nA2

A: a+b two layers
X: MHC antigen-recognition domain
H: MHC antigen-recognition domain
T: MHC antigen-recognition domain
F: MHC_I

UID:	000006589
Type:	Manual and representative domain
Range:	A:1-181
Ligands:	GOL
PDB:	1k5n
PDB Description:	MAJOR HISTOCOMPATIBILITY COMPLEX MOLECULE HLA-B*2709
UniProt:	P03989
Hsap BLAST neighbor:	Q31612
Species:	Homo sapiens

Domains in the same chain:

Download Pymol

e1k5nA2	A:1-181	MHC antigen-recognition domain	MHC antigen-recognition domain	MHC antigen-recognition domain
e1k5nA1	A:182-276	Immunoglobulin-like beta-sandwich	Immunoglobulin-related	Immunoglobulin/Fibronectin type III/E set domains/PapD-like

Domains in the same PDB:

e1k5nA2	A:1-181	MHC antigen-recognition domain	MHC antigen-recognition domain	MHC antigen-recognition domain
e1k5nA1	A:182-276	Immunoglobulin-like beta-sandwich	Immunoglobulin-related	Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e1k5nB1	B:0-99	Immunoglobulin-like beta-sandwich	Immunoglobulin-related	Immunoglobulin/Fibronectin type III/E set domains/PapD-like

Structural contacts of domain e1k5nA2 of H-group "MHC antigen-recognition domain":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e1k5nB1	A:X,Y,Z->B:x,y,z	Immunoglobulin-related	Interaction Interface Pymol
e1k5nA2	A:x,y,z->A:X-1,Y,Z	MHC antigen-recognition domain	Interaction Interface Pymol
e1k5nA1	A:X-1,Y,Z->A:x,y,z	Immunoglobulin-related	Interaction Interface Pymol
e1k5nA2	A:X-1,Y,Z->A:x,y,z	MHC antigen-recognition domain	Interaction Interface Pymol
e1k5nA2	A:x,y,z->A:-X+1,Y-1/2,-Z+1/2	MHC antigen-recognition domain	Interaction Interface Pymol
e1k5nA2	A:-X+1,Y-1/2,-Z+1/2->A:x,y,z	MHC antigen-recognition domain	Interaction Interface Pymol
e1k5nB1	A:-X+1,Y-1/2,-Z+1/2->B:x,y,z	Immunoglobulin-related	Interaction Interface Pymol
e1k5nA1	A:x,y,z->A:-X+1/2,-Y,Z-1/2	Immunoglobulin-related	Interaction Interface Pymol
e1k5nA1	A:X-1/2,-Y+1/2,-Z+1->A:x,y,z	Immunoglobulin-related	Interaction Interface Pymol
e1k5nB1	A:-X,Y-1/2,-Z+1/2->B:x,y,z	Immunoglobulin-related	Interaction Interface Pymol