ECOD: domain e1k8wA2

Domain ID e1k8wA2

A: a+b two layers
X: Alpha-beta plaits
H: Pseudouridine synthase
T: Pseudouridine synthase
F: TruB_N,TruB_C_2

UID:	000005391
Type:	Manual and representative domain
Range:	A:9-250
Ligands:	SO4
PDB:	1k8w
PDB Description:	TRNA PSEUDOURIDINE SYNTHASE B
UniProt:	P60340
Hsap BLAST neighbor:	Q8WWH5
Species:	Escherichia coli

Domains in the same chain:

Download Pymol

e1k8wA2	A:9-250	Alpha-beta plaits	Pseudouridine synthase	Pseudouridine synthase
e1k8wA1	A:251-312	cradle loop barrel	RIFT-related	PUA domain

Domains in the same PDB:

e1k8wA2	A:9-250	Alpha-beta plaits	Pseudouridine synthase	Pseudouridine synthase
e1k8wA1	A:251-312	cradle loop barrel	RIFT-related	PUA domain

Structural contacts of domain e1k8wA2 of H-group "Pseudouridine synthase":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e1k8wA2	A:x,y,z->A:-X+1/2,Y-1/2,-Z+1	Pseudouridine synthase	Interaction Interface Pymol
e1k8wA2	A:-X+1/2,Y-1/2,-Z+1->A:x,y,z	Pseudouridine synthase	Interaction Interface Pymol
e1k8wA2	A:x,y,z->A:-X+1/2,Y-1/2,-Z+2	Pseudouridine synthase	Interaction Interface Pymol
e1k8wA2	A:-X+1/2,Y-1/2,-Z+2->A:x,y,z	Pseudouridine synthase	Interaction Interface Pymol
e1k8wA1	A:X-1/2,Y-1/2,Z->A:x,y,z	RIFT-related	Interaction Interface Pymol