Domain ID e1kb9G1

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  • A: alpha arrays
  • X: 14 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)
  • H: 14 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)
  • T: 14 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)
  • F: UCR_14kD
UID: 000053532
Type: Automatic domain
Parent: e1ppjF1
Range: G:3-127
Ligands: CDL PEF
PDB: 1kb9
PDB Description: UBIQUINOL-CYTOCHROME C REDUCTASE COMPLEX 14 KD PROTEIN
UniProt: P00128
Hsap BLAST neighbor: P14927
Species: Saccharomyces cerevisiae

Structure of domain e1kb9G1

Domains in the same chain:

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e1kb9G1 G:3-127 14 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) 14 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) 14 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)

Domains in the same PDB:

e1kb9A1 A:27-239 LuxS, MPP, ThrRS/AlaRS common domain LuxS, MPP, ThrRS/AlaRS common domain LuxS/MPP-like metallohydrolase
e1kb9A2 A:240-457 LuxS, MPP, ThrRS/AlaRS common domain LuxS, MPP, ThrRS/AlaRS common domain LuxS/MPP-like metallohydrolase
e1kb9B1 B:17-218 LuxS, MPP, ThrRS/AlaRS common domain LuxS, MPP, ThrRS/AlaRS common domain LuxS/MPP-like metallohydrolase
e1kb9B2 B:219-368 LuxS, MPP, ThrRS/AlaRS common domain LuxS, MPP, ThrRS/AlaRS common domain LuxS/MPP-like metallohydrolase
e1kb9C2 C:14-261 Transmembrane heme-binding four-helical bundle Transmembrane heme-binding four-helical bundle Transmembrane di-heme cytochromes
e1kb9C1 C:262-380 a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)
e1kb9D1 D:65-260 Cytochrome c-like Cytochrome c Cytochrome c
e1kb9D2 D:261-306 cytochrome c1 transmembrane anchor cytochrome c1 transmembrane anchor cytochrome c1 transmembrane anchor
e1kb9E2 E:31-86 iron-sulfur subunit (ISP) transmembrane anchor iron-sulfur subunit (ISP) transmembrane anchor iron-sulfur subunit (ISP) transmembrane anchor
e1kb9E1 E:90-156,E:199-214 ISP domain ISP domain ISP domain
e1kb9E3 E:157-198 Trm112p-like Trm112p-like Trm112p-like
e1kb9F1 F:74-147 cytochrome bc1 complex 11 kDa protein-like Non-heme 11 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) Non-heme 11 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)
e1kb9G1 G:3-127 14 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) 14 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) 14 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)
e1kb9H1 H:2-94 Ubiquinone-binding protein QP-C of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) Ubiquinone-binding protein QP-C of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) Ubiquinone-binding protein QP-C of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)
e1kb9I1 I:4-58 Subunit X (non-heme 7 kDa protein) of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) Subunit X (non-heme 7 kDa protein) of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) Subunit X (non-heme 7 kDa protein) of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)
e1kb9J1 J:1-122 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e1kb9K1 K:1-107 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like

Structural contacts of domain e1kb9G1 of H-group "14 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e1kb9C1 G:x,y,z->C:X,Y,Z a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) Interaction Interface Pymol
e1kb9C2 G:x,y,z->C:X,Y,Z Transmembrane heme-binding four-helical bundle Interaction Interface Pymol
e1kb9H1 G:X,Y,Z->H:x,y,z Ubiquinone-binding protein QP-C of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) Interaction Interface Pymol
e1kb9D2 G:x,y,z->D:X,Y,Z cytochrome c1 transmembrane anchor Interaction Interface Pymol
e1kb9B1 G:x,y,z->B:-X,Y,-Z LuxS, MPP, ThrRS/AlaRS common domain Interaction Interface Pymol
e1kb9A2 G:x,y,z->A:-X,Y,-Z LuxS, MPP, ThrRS/AlaRS common domain Interaction Interface Pymol
e1kb9J1 G:x,y,z->J:X-1/2,Y+1/2,Z-1 Immunoglobulin-related Interaction Interface Pymol
e1kb9A2 G:x,y,z->A:X,Y,Z LuxS, MPP, ThrRS/AlaRS common domain Interaction Interface Pymol