Domain ID e1kfsA4

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  • A: mixed a+b and a/b
  • X: Ribonuclease H-like
  • H: Ribonuclease H-like
  • T: Ribonuclease H-like
  • F: DNA_pol_A_exo1
UID: 000011139
Type: Manual and representative domain
Range: A:324-518
Ligands: MG ZN
PDB: 1kfs
PDB Description: PROTEIN (DNA POLYMERASE I KLENOW FRAGMENT (E.C.2.7.7.7))
UniProt: P00582
Species: Escherichia coli

Structure of domain e1kfsA4

Structural contacts of domain e1kfsA4 of H-group "Ribonuclease H-like":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e1kfsA1 A:x,y,z->A:-X+1,-Y,Z-1/2 helical bundle in Bacillus stearothermophilus-like DNA polymerase I Interaction Interface Pymol
e1kfsA4 A:x,y,z->A:-Y+1,X,Z-1/4 Ribonuclease H-like Interaction Interface Pymol
e1kfsA3 A:x,y,z->A:-Y+1,X,Z-1/4 Adenylyl and guanylyl cyclase catalytic domain-like Interaction Interface Pymol
e1kfsA2 A:x,y,z->A:-Y+1,X,Z-1/4 "fingers" domain in bacteriophage RB69-like DNA polymerase I Interaction Interface Pymol
e1kfsA4 A:-Y+1,X,Z-1/4->A:x,y,z Ribonuclease H-like Interaction Interface Pymol