Domain ID e1kfyB2

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  • A: a+b two layers
  • X: beta-Grasp
  • H: Ubiquitin-related
  • T: Ubiquitin-like
  • F: Fer2_3
UID: 000072003
Type: Automatic domain
Parent: e2bs2B2
Range: B:1-105
Ligands: FES
PDB: 1kfy
PDB Description: FUMARATE REDUCTASE IRON-SULFUR PROTEIN
UniProt: P0AC47
Hsap BLAST neighbor: P21912
Species: Escherichia coli

Structure of domain e1kfyB2

Domains in the same chain:

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e1kfyB2 B:1-105 beta-Grasp Ubiquitin-related Ubiquitin-like
e1kfyB1 B:106-243 alpha-helical ferredoxin-like alpha-helical ferredoxin alpha-helical ferredoxin

Domains in the same PDB:

e1kfyA3 A:0-225,A:358-442 Rossmann-like Rossmann-related FAD/NAD(P)-binding domain
e1kfyA2 A:226-357 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain
e1kfyA1 A:443-576 Spectrin repeat-like Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain
e1kfyB2 B:1-105 beta-Grasp Ubiquitin-related Ubiquitin-like
e1kfyB1 B:106-243 alpha-helical ferredoxin-like alpha-helical ferredoxin alpha-helical ferredoxin
e1kfyC1 C:1-130 Transmembrane heme-binding four-helical bundle Transmembrane heme-binding four-helical bundle Fumarate reductase respiratory complex transmembrane subunits
e1kfyD1 D:0-118 Transmembrane heme-binding four-helical bundle Transmembrane heme-binding four-helical bundle Fumarate reductase respiratory complex transmembrane subunits
e1kfyM3 M:0-225,M:358-442 Rossmann-like Rossmann-related FAD/NAD(P)-binding domain
e1kfyM2 M:226-357 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain
e1kfyM1 M:443-576 Spectrin repeat-like Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain
e1kfyN2 N:1-105 beta-Grasp Ubiquitin-related Ubiquitin-like
e1kfyN1 N:106-243 alpha-helical ferredoxin-like alpha-helical ferredoxin alpha-helical ferredoxin
e1kfyO1 O:1-130 Transmembrane heme-binding four-helical bundle Transmembrane heme-binding four-helical bundle Fumarate reductase respiratory complex transmembrane subunits
e1kfyP1 P:0-118 Transmembrane heme-binding four-helical bundle Transmembrane heme-binding four-helical bundle Fumarate reductase respiratory complex transmembrane subunits

Structural contacts of domain e1kfyB2 of H-group "Ubiquitin-related":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e1kfyA3 B:x,y,z->A:X,Y,Z Rossmann-related Interaction Interface Pymol
e1kfyA2 B:x,y,z->A:X,Y,Z Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain Interaction Interface Pymol
e1kfyA1 B:x,y,z->A:X,Y,Z Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain Interaction Interface Pymol
e1kfyC1 B:X,Y,Z->C:x,y,z Transmembrane heme-binding four-helical bundle Interaction Interface Pymol