Domain ID e1khdD2

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  • A: a/b three-layered sandwiches
  • X: Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain
  • H: Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain
  • T: Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain
  • F: Glycos_transf_3
UID: 000109593
Type: Automatic domain
Parent: e1brwA3
Range: D:81-344
PDB: 1khd
PDB Description: Anthranilate phosphoribosyltransferase
UniProt: Q8VP84
Species: Pectobacterium carotovorum

Structure of domain e1khdD2

Domains in the same chain:

e1khdD1 D:12-80 Nucleoside phosphorylase/phosphoribosyltransferase-N Nucleoside phosphorylase/phosphoribosyltransferase-N Nucleoside phosphorylase/phosphoribosyltransferase-N
e1khdD2 D:81-344 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain

Domains in the same PDB:

e1khdA1 A:12-80 Nucleoside phosphorylase/phosphoribosyltransferase-N Nucleoside phosphorylase/phosphoribosyltransferase-N Nucleoside phosphorylase/phosphoribosyltransferase-N
e1khdA2 A:81-344 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain
e1khdB1 B:12-80 Nucleoside phosphorylase/phosphoribosyltransferase-N Nucleoside phosphorylase/phosphoribosyltransferase-N Nucleoside phosphorylase/phosphoribosyltransferase-N
e1khdB2 B:81-344 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain
e1khdC1 C:12-80 Nucleoside phosphorylase/phosphoribosyltransferase-N Nucleoside phosphorylase/phosphoribosyltransferase-N Nucleoside phosphorylase/phosphoribosyltransferase-N
e1khdC2 C:81-344 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain
e1khdD1 D:12-80 Nucleoside phosphorylase/phosphoribosyltransferase-N Nucleoside phosphorylase/phosphoribosyltransferase-N Nucleoside phosphorylase/phosphoribosyltransferase-N
e1khdD2 D:81-344 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain

Structural contacts of domain e1khdD2 of H-group "Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e1khdA1 D:x,y,z->A:X,Y,Z Nucleoside phosphorylase/phosphoribosyltransferase-N Interaction Interface Pymol
e1khdC2 D:-X-1,Y-1/2,-Z+3/2->C:x,y,z Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain Interaction Interface Pymol
e1khdB2 D:-X-1/2,-Y,Z-1/2->B:x,y,z Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain Interaction Interface Pymol
e1khdD2 D:x,y,z->D:-X,Y-1/2,-Z+3/2 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain Interaction Interface Pymol
e1khdD2 D:-X,Y-1/2,-Z+3/2->D:x,y,z Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain Interaction Interface Pymol
e1khdD1 D:-X,Y-1/2,-Z+3/2->D:x,y,z Nucleoside phosphorylase/phosphoribosyltransferase-N Interaction Interface Pymol
e1khdC2 D:-X,Y-1/2,-Z+3/2->C:x,y,z Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain Interaction Interface Pymol
e1khdC2 D:x,y,z->C:X,Y,Z Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain Interaction Interface Pymol