Domain ID e1kjtA1

Download files:
  • A: a+b two layers
  • X: beta-Grasp
  • H: Ubiquitin-related
  • T: Ubiquitin-like
  • F: ATG8
UID: 000072238
Type: Automatic domain
Parent: e3d32A1
Range: A:1-114
Ligands: NA NI
PDB: 1kjt
PDB Description: GABARAP
UniProt: P60517
Hsap BLAST neighbor: O95166
Species: Rattus norvegicus

Structure of domain e1kjtA1

Domains in the same chain:

e1kjtA1 A:1-114 beta-Grasp Ubiquitin-related Ubiquitin-like

Domains in the same PDB:

e1kjtA1 A:1-114 beta-Grasp Ubiquitin-related Ubiquitin-like

Structural contacts of domain e1kjtA1 of H-group "Ubiquitin-related":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e1kjtA1 A:x,y,z->A:-X+3/2,-Y,Z-1/2 Ubiquitin-related Interaction Interface Pymol
e1kjtA1 A:-X+3/2,-Y,Z-1/2->A:x,y,z Ubiquitin-related Interaction Interface Pymol
e1kjtA1 A:x,y,z->A:X-1/2,-Y+1/2,-Z Ubiquitin-related Interaction Interface Pymol
e1kjtA1 A:X-1/2,-Y+1/2,-Z->A:x,y,z Ubiquitin-related Interaction Interface Pymol
e1kjtA1 A:x,y,z->A:X-1,Y,Z Ubiquitin-related Interaction Interface Pymol
e1kjtA1 A:X-1,Y,Z->A:x,y,z Ubiquitin-related Interaction Interface Pymol
e1kjtA1 A:x,y,z->A:-X+2,Y-1/2,-Z+1/2 Ubiquitin-related Interaction Interface Pymol
e1kjtA1 A:-X+2,Y-1/2,-Z+1/2->A:x,y,z Ubiquitin-related Interaction Interface Pymol
e1kjtA1 A:x,y,z->A:-X+1,Y-1/2,-Z+1/2 Ubiquitin-related Interaction Interface Pymol
e1kjtA1 A:-X+1,Y-1/2,-Z+1/2->A:x,y,z Ubiquitin-related Interaction Interface Pymol
e1kjtA1 A:x,y,z->A:X-1/2,-Y-1/2,-Z Ubiquitin-related Interaction Interface Pymol
e1kjtA1 A:X-1/2,-Y-1/2,-Z->A:x,y,z Ubiquitin-related Interaction Interface Pymol