ECOD: domain e1kjzA1

Domain ID e1kjzA1

A: beta barrels
X: cradle loop barrel
H: RIFT-related
T: Alanine racemase-C
F: GTP_EFTU_D2

UID:	000021667
Type:	Automatic domain
Parent:	e2c78A1
Range:	A:201-321
PDB:	1kjz
PDB Description:	eIF2gamma
UniProt:	Q9V1G0
Hsap BLAST neighbor:	P41091
Species:	Pyrococcus abyssi

Domain
In chain context
In PDB context

Structure of domain e1kjzA1

Domains in the same chain:

Download Pymol

e1kjzA4	A:6-55,A:84-200	P-loop domains-like	P-loop domains-related	P-loop containing nucleoside triphosphate hydrolases
e1kjzA3	A:56-83	Rubredoxin-like	Rubredoxin-related	Rubredoxin-related
e1kjzA1	A:201-321	cradle loop barrel	RIFT-related	Alanine racemase-C
e1kjzA2	A:322-410	cradle loop barrel	RIFT-related	Aminomethyltransferase beta-barrel domain

Domains in the same PDB:

e1kjzA4	A:6-55,A:84-200	P-loop domains-like	P-loop domains-related	P-loop containing nucleoside triphosphate hydrolases
e1kjzA3	A:56-83	Rubredoxin-like	Rubredoxin-related	Rubredoxin-related
e1kjzA1	A:201-321	cradle loop barrel	RIFT-related	Alanine racemase-C
e1kjzA2	A:322-410	cradle loop barrel	RIFT-related	Aminomethyltransferase beta-barrel domain

Structural contacts of domain e1kjzA1 of H-group "RIFT-related":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e1kjzA4	A:-X,Y-1/2,-Z+1->A:x,y,z	P-loop domains-related	Interaction Interface Pymol
e1kjzA1	A:x,y,z->A:-X+1,Y-1/2,-Z+1	RIFT-related	Interaction Interface Pymol
e1kjzA1	A:-X+1,Y-1/2,-Z+1->A:x,y,z	RIFT-related	Interaction Interface Pymol