ECOD: domain e1kmhB1

Domain ID e1kmhB1

A: beta barrels
X: cradle loop barrel
H: RIFT-related
T: Alanine racemase-C
F: ATP-synt_ab_N

UID:	000021526
Type:	Automatic domain
Parent:	e2jdiA1
Range:	B:20-97
Ligands:	TTX
PDB:	1kmh
PDB Description:	ATPase beta subunit
UniProt:	P00825
Hsap BLAST neighbor:	P06576
Species:	Spinacia oleracea

Domain
In chain context
In PDB context

Structure of domain e1kmhB1

Domains in the same chain:

Download Pymol

e1kmhB1	B:20-97	cradle loop barrel	RIFT-related	Alanine racemase-C
e1kmhB2	B:98-374	P-loop domains-like	P-loop domains-related	P-loop containing nucleoside triphosphate hydrolases
e1kmhB3	B:378-485	C-terminal domain of alpha and beta subunits of F1 ATP synthase	C-terminal domain of alpha and beta subunits of F1 ATP synthase	C-terminal domain of alpha and beta subunits of F1 ATP synthase

Domains in the same PDB:

e1kmhA1	A:25-95	cradle loop barrel	RIFT-related	Alanine racemase-C
e1kmhA3	A:97-372	P-loop domains-like	P-loop domains-related	P-loop containing nucleoside triphosphate hydrolases
e1kmhA2	A:373-501	C-terminal domain of alpha and beta subunits of F1 ATP synthase	C-terminal domain of alpha and beta subunits of F1 ATP synthase	C-terminal domain of alpha and beta subunits of F1 ATP synthase
e1kmhB1	B:20-97	cradle loop barrel	RIFT-related	Alanine racemase-C
e1kmhB2	B:98-374	P-loop domains-like	P-loop domains-related	P-loop containing nucleoside triphosphate hydrolases
e1kmhB3	B:378-485	C-terminal domain of alpha and beta subunits of F1 ATP synthase	C-terminal domain of alpha and beta subunits of F1 ATP synthase	C-terminal domain of alpha and beta subunits of F1 ATP synthase

Structural contacts of domain e1kmhB1 of H-group "RIFT-related":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e1kmhA1	B:x,y,z->A:-Y+1,X-Y,Z	RIFT-related	Interaction Interface Pymol
e1kmhA3	B:x,y,z->A:X,Y,Z	P-loop domains-related	Interaction Interface Pymol
e1kmhA1	B:x,y,z->A:X,Y,Z	RIFT-related	Interaction Interface Pymol
e1kmhB1	B:x,y,z->B:-X+2/3,-X+Y+1/3,-Z+1/3	RIFT-related	Interaction Interface Pymol
e1kmhB2	B:x,y,z->B:-X+2/3,-X+Y+1/3,-Z+1/3	P-loop domains-related	Interaction Interface Pymol
e1kmhB2	B:-X+2/3,-X+Y+1/3,-Z+1/3->B:x,y,z	P-loop domains-related	Interaction Interface Pymol
e1kmhB1	B:-X+2/3,-X+Y+1/3,-Z+1/3->B:x,y,z	RIFT-related	Interaction Interface Pymol
e1kmhA3	B:x,y,z->A:-X+2/3,-X+Y+1/3,-Z+1/3	P-loop domains-related	Interaction Interface Pymol