ECOD: domain e1kmnC2

Domain ID e1kmnC2

A: a/b three-layered sandwiches
X: Anticodon-binding domain of Class II aaRS
H: Anticodon-binding domain of Class II aaRS
T: Anticodon-binding domain of Class II aaRS
F: HGTP_anticodon

UID:	000107404
Type:	Automatic domain
Parent:	e1kmmA2
Range:	C:326-424
PDB:	1kmn
PDB Description:	HISTIDYL-TRNA SYNTHETASE
UniProt:	P60906
Species:	Escherichia coli

Domain
In chain context
In PDB context

Structure of domain e1kmnC2

Domains in the same chain:

Download Pymol

e1kmnC1	C:4-188,C:223-325	Class II aaRS and biotin synthetases	Class II aaRS and biotin synthetases	Class II aaRS and biotin synthetases
e1kmnC2	C:326-424	Anticodon-binding domain of Class II aaRS	Anticodon-binding domain of Class II aaRS	Anticodon-binding domain of Class II aaRS

Domains in the same PDB:

e1kmnA1	A:4-185,A:228-325	Class II aaRS and biotin synthetases	Class II aaRS and biotin synthetases	Class II aaRS and biotin synthetases
e1kmnA2	A:326-424	Anticodon-binding domain of Class II aaRS	Anticodon-binding domain of Class II aaRS	Anticodon-binding domain of Class II aaRS
e1kmnB1	B:4-169,B:228-325	Class II aaRS and biotin synthetases	Class II aaRS and biotin synthetases	Class II aaRS and biotin synthetases
e1kmnB2	B:326-424	Anticodon-binding domain of Class II aaRS	Anticodon-binding domain of Class II aaRS	Anticodon-binding domain of Class II aaRS
e1kmnC1	C:4-188,C:223-325	Class II aaRS and biotin synthetases	Class II aaRS and biotin synthetases	Class II aaRS and biotin synthetases
e1kmnC2	C:326-424	Anticodon-binding domain of Class II aaRS	Anticodon-binding domain of Class II aaRS	Anticodon-binding domain of Class II aaRS
e1kmnD4	D:2-169,D:229-323	Class II aaRS and biotin synthetases	Class II aaRS and biotin synthetases	Class II aaRS and biotin synthetases
e1kmnD3	D:324-424	Anticodon-binding domain of Class II aaRS	Anticodon-binding domain of Class II aaRS	Anticodon-binding domain of Class II aaRS

Structural contacts of domain e1kmnC2 of H-group "Anticodon-binding domain of Class II aaRS":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e1kmnD4	C:X,Y,Z->D:x,y,z	Class II aaRS and biotin synthetases	Interaction Interface Pymol
e1kmnB2	C:X-1,Y+1,Z+1->B:x,y,z	Anticodon-binding domain of Class II aaRS	Interaction Interface Pymol