| UID: | 000021462 |
|---|---|
| Type: | Automatic domain |
| Parent: | e7odcA1 |
| Range: | A:2-31,A:279-420 |
| Ligands: | LYS PLP |
| PDB: | 1ko0 |
| PDB Description: | DIAMINOPIMELATE DECARBOXYLASE |
| UniProt: | P00861 |
| Species: | Escherichia coli |
Structure of domain e1ko0A1
Domains in the same chain:
| e1ko0A1 | A:2-31,A:279-420 | cradle loop barrel | RIFT-related | Alanine racemase-C |
| e1ko0A2 | A:32-278 | TIM beta/alpha-barrel | TIM barrels | TIM barrels |
Domains in the same PDB:
| e1ko0A1 | A:2-31,A:279-420 | cradle loop barrel | RIFT-related | Alanine racemase-C |
| e1ko0A2 | A:32-278 | TIM beta/alpha-barrel | TIM barrels | TIM barrels |
Structural contacts of domain e1ko0A1 of H-group "RIFT-related":
The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.
| Domain ID | Symmetry operator | H-group | Visualization |
|---|---|---|---|
| e1ko0A2 | A:x,y,z->A:-Y+1,-X+1,-Z+5/6 | TIM barrels | Interaction Interface Pymol |
| e1ko0A1 | A:x,y,z->A:-Y+1,-X+1,-Z+5/6 | RIFT-related | Interaction Interface Pymol |
| e1ko0A2 | A:-Y+1,-X+1,-Z+5/6->A:x,y,z | TIM barrels | Interaction Interface Pymol |
| e1ko0A1 | A:-Y+1,-X+1,-Z+5/6->A:x,y,z | RIFT-related | Interaction Interface Pymol |
| e1ko0A2 | A:-X+1,-X+Y,-Z+2/3->A:x,y,z | TIM barrels | Interaction Interface Pymol |
| e1ko0A1 | A:x,y,z->A:X-Y+1,X,Z+1/6 | RIFT-related | Interaction Interface Pymol |
| e1ko0A1 | A:X-Y+1,X,Z+1/6->A:x,y,z | RIFT-related | Interaction Interface Pymol |
