Domain ID e1kogE2

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  • A: a/b three-layered sandwiches
  • X: Anticodon-binding domain of Class II aaRS
  • H: Anticodon-binding domain of Class II aaRS
  • T: Anticodon-binding domain of Class II aaRS
  • F: HGTP_anticodon
UID: 000107426
Type: Automatic domain
Parent: e1kmmA2
Range: E:533-642
PDB: 1kog
PDB Description: THREONYL-TRNA SYNTHETASE
UniProt: P0A8M3
Hsap BLAST neighbor: P26639
Species: Escherichia coli

Structure of domain e1kogE2

Domains in the same chain:

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e1kogE1 E:242-532 Class II aaRS and biotin synthetases Class II aaRS and biotin synthetases Class II aaRS and biotin synthetases
e1kogE2 E:533-642 Anticodon-binding domain of Class II aaRS Anticodon-binding domain of Class II aaRS Anticodon-binding domain of Class II aaRS

Domains in the same PDB:

e1kogA1 A:242-532 Class II aaRS and biotin synthetases Class II aaRS and biotin synthetases Class II aaRS and biotin synthetases
e1kogA2 A:533-642 Anticodon-binding domain of Class II aaRS Anticodon-binding domain of Class II aaRS Anticodon-binding domain of Class II aaRS
e1kogB1 B:242-532 Class II aaRS and biotin synthetases Class II aaRS and biotin synthetases Class II aaRS and biotin synthetases
e1kogB2 B:533-642 Anticodon-binding domain of Class II aaRS Anticodon-binding domain of Class II aaRS Anticodon-binding domain of Class II aaRS
e1kogC1 C:242-532 Class II aaRS and biotin synthetases Class II aaRS and biotin synthetases Class II aaRS and biotin synthetases
e1kogC2 C:533-642 Anticodon-binding domain of Class II aaRS Anticodon-binding domain of Class II aaRS Anticodon-binding domain of Class II aaRS
e1kogD1 D:242-532 Class II aaRS and biotin synthetases Class II aaRS and biotin synthetases Class II aaRS and biotin synthetases
e1kogD2 D:533-642 Anticodon-binding domain of Class II aaRS Anticodon-binding domain of Class II aaRS Anticodon-binding domain of Class II aaRS
e1kogE1 E:242-532 Class II aaRS and biotin synthetases Class II aaRS and biotin synthetases Class II aaRS and biotin synthetases
e1kogE2 E:533-642 Anticodon-binding domain of Class II aaRS Anticodon-binding domain of Class II aaRS Anticodon-binding domain of Class II aaRS
e1kogF1 F:242-532 Class II aaRS and biotin synthetases Class II aaRS and biotin synthetases Class II aaRS and biotin synthetases
e1kogF2 F:533-642 Anticodon-binding domain of Class II aaRS Anticodon-binding domain of Class II aaRS Anticodon-binding domain of Class II aaRS
e1kogG1 G:242-532 Class II aaRS and biotin synthetases Class II aaRS and biotin synthetases Class II aaRS and biotin synthetases
e1kogG2 G:533-642 Anticodon-binding domain of Class II aaRS Anticodon-binding domain of Class II aaRS Anticodon-binding domain of Class II aaRS
e1kogH1 H:242-532 Class II aaRS and biotin synthetases Class II aaRS and biotin synthetases Class II aaRS and biotin synthetases
e1kogH2 H:533-642 Anticodon-binding domain of Class II aaRS Anticodon-binding domain of Class II aaRS Anticodon-binding domain of Class II aaRS

Structural contacts of domain e1kogE2 of H-group "Anticodon-binding domain of Class II aaRS":

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The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e1kogF1 E:X,Y,Z->F:x,y,z Class II aaRS and biotin synthetases Interaction Interface Pymol