Domain ID e1kqfA1

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  • A: beta barrels
  • X: cradle loop barrel
  • H: RIFT-related
  • T: double psi
  • F: Molydop_binding
UID: 000000022
Type: Manual and representative domain
Range: A:851-1015
Ligands: MGD
PDB: 1kqf
PDB Description: FORMATE DEHYDROGENASE, NITRATE-INDUCIBLE, MAJOR SUBUNIT
UniProt: P24183
Species: Escherichia coli

Structure of domain e1kqfA1

Domains in the same chain:

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e1kqfA3 A:34-105 Formate dehydrogenase/DMSO reductase, domain 1 Formate dehydrogenase/DMSO reductase, domain 1 Formate dehydrogenase/DMSO reductase, domain 1
e1kqfA4 A:106-195,A:447-850 Rossmann-like Formate dehydrogenase/DMSO reductase, domains 2 and 3 Formate dehydrogenase/DMSO reductase, domains 2 and 3
e1kqfA5 A:196-446 Rossmann-like Formate dehydrogenase/DMSO reductase, domains 2 and 3 Formate dehydrogenase/DMSO reductase, domains 2 and 3
e1kqfA1 A:851-1015 cradle loop barrel RIFT-related double psi

Domains in the same PDB:

e1kqfA3 A:34-105 Formate dehydrogenase/DMSO reductase, domain 1 Formate dehydrogenase/DMSO reductase, domain 1 Formate dehydrogenase/DMSO reductase, domain 1
e1kqfA4 A:106-195,A:447-850 Rossmann-like Formate dehydrogenase/DMSO reductase, domains 2 and 3 Formate dehydrogenase/DMSO reductase, domains 2 and 3
e1kqfA5 A:196-446 Rossmann-like Formate dehydrogenase/DMSO reductase, domains 2 and 3 Formate dehydrogenase/DMSO reductase, domains 2 and 3
e1kqfA1 A:851-1015 cradle loop barrel RIFT-related double psi
e1kqfB4 B:2-99,B:160-245 4Fe-4S ferredoxin 4Fe-4S ferredoxin 4Fe-4S ferredoxin
e1kqfB3 B:100-159 4Fe-4S ferredoxin 4Fe-4S ferredoxin 4Fe-4S ferredoxin
e1kqfB1 B:246-290 Iron-sulfur subunit of formate dehydrogenase N, transmembrane anchor Iron-sulfur subunit of formate dehydrogenase N, transmembrane anchor Iron-sulfur subunit of formate dehydrogenase N, transmembrane anchor
e1kqfC1 C:2-217 Transmembrane heme-binding four-helical bundle Transmembrane heme-binding four-helical bundle Transmembrane di-heme cytochromes

Structural contacts of domain e1kqfA1 of H-group "RIFT-related":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e1kqfB4 A:X,Y,Z->B:x,y,z 4Fe-4S ferredoxin Interaction Interface Pymol
e1kqfB4 A:x,y,z->B:Z-1/2,-X+1/2,-Y+1 4Fe-4S ferredoxin Interaction Interface Pymol
e1kqfA4 A:-Z+1/2,-X,Y+1/2->A:x,y,z Formate dehydrogenase/DMSO reductase, domains 2 and 3 Interaction Interface Pymol