Domain ID e1ktvA6

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  • A: a+b two layers
  • X: Alpha-beta plaits
  • H: EF-G C-terminal domain-like
  • T: EF-G C-terminal domain-like
  • F: EFG_C
UID: 001268273
Type: Automatic domain
Parent: e2dy1A3
Range: A:586-689
PDB: 1ktv
PDB Description: ELONGATION FACTOR G
UniProt: P13551
Hsap BLAST neighbor: Q96RP9
Species: Thermus thermophilus

Structure of domain e1ktvA6

Domains in the same chain:

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e1ktvA9 A:5-39,A:68-284 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e1ktvA7 A:285-401 cradle loop barrel RIFT-related Alanine racemase-C
e1ktvA8 A:402-475 Alpha-beta plaits EF-G C-terminal domain-like EF-G C-terminal domain-like
e1ktvA10 A:476-585 Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like
e1ktvA6 A:586-689 Alpha-beta plaits EF-G C-terminal domain-like EF-G C-terminal domain-like

Domains in the same PDB:

e1ktvA9 A:5-39,A:68-284 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e1ktvA7 A:285-401 cradle loop barrel RIFT-related Alanine racemase-C
e1ktvA8 A:402-475 Alpha-beta plaits EF-G C-terminal domain-like EF-G C-terminal domain-like
e1ktvA10 A:476-585 Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like
e1ktvA6 A:586-689 Alpha-beta plaits EF-G C-terminal domain-like EF-G C-terminal domain-like
e1ktvB9 B:5-39,B:68-284 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e1ktvB7 B:285-401 cradle loop barrel RIFT-related Alanine racemase-C
e1ktvB8 B:402-475 Alpha-beta plaits EF-G C-terminal domain-like EF-G C-terminal domain-like
e1ktvB10 B:476-585 Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like
e1ktvB6 B:586-689 Alpha-beta plaits EF-G C-terminal domain-like EF-G C-terminal domain-like

Structural contacts of domain e1ktvA6 of H-group "EF-G C-terminal domain-like":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e1ktvB6 A:-X+1,Y-1/2,-Z+3/2->B:x,y,z EF-G C-terminal domain-like Interaction Interface Pymol
e1ktvB9 A:X-1/2,-Y+1/2,-Z+1->B:x,y,z P-loop domains-related Interaction Interface Pymol
e1ktvA7 A:-X+2,Y-1/2,-Z+3/2->A:x,y,z RIFT-related Interaction Interface Pymol