Domain ID e1l0nB2

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  • A: a+b two layers
  • X: LuxS, MPP, ThrRS/AlaRS common domain
  • H: LuxS, MPP, ThrRS/AlaRS common domain
  • T: LuxS/MPP-like metallohydrolase
  • F: Peptidase_M16_C
UID: 000067313
Type: Automatic domain
Parent: e1hr6A2
Range: B:236-439
PDB: 1l0n
PDB Description: UBIQUINOL-CYTOCHROME C REDUCTASE COMPLEX CORE PROTEIN 2
UniProt: P23004
Hsap BLAST neighbor: P22695
Species: Bos taurus

Structure of domain e1l0nB2

Domains in the same chain:

e1l0nB1 B:17-235 LuxS, MPP, ThrRS/AlaRS common domain LuxS, MPP, ThrRS/AlaRS common domain LuxS/MPP-like metallohydrolase
e1l0nB2 B:236-439 LuxS, MPP, ThrRS/AlaRS common domain LuxS, MPP, ThrRS/AlaRS common domain LuxS/MPP-like metallohydrolase

Domains in the same PDB:

e1l0nA1 A:2-233 LuxS, MPP, ThrRS/AlaRS common domain LuxS, MPP, ThrRS/AlaRS common domain LuxS/MPP-like metallohydrolase
e1l0nA2 A:234-442 LuxS, MPP, ThrRS/AlaRS common domain LuxS, MPP, ThrRS/AlaRS common domain LuxS/MPP-like metallohydrolase
e1l0nB1 B:17-235 LuxS, MPP, ThrRS/AlaRS common domain LuxS, MPP, ThrRS/AlaRS common domain LuxS/MPP-like metallohydrolase
e1l0nB2 B:236-439 LuxS, MPP, ThrRS/AlaRS common domain LuxS, MPP, ThrRS/AlaRS common domain LuxS/MPP-like metallohydrolase
e1l0nC2 C:15-260 Transmembrane heme-binding four-helical bundle Transmembrane heme-binding four-helical bundle Transmembrane di-heme cytochromes
e1l0nC1 C:261-379 a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)
e1l0nD1 D:1-195 Cytochrome c-like Cytochrome c Cytochrome c
e1l0nD2 D:196-241 cytochrome c1 transmembrane anchor cytochrome c1 transmembrane anchor cytochrome c1 transmembrane anchor
e1l0nE2 E:1-69 iron-sulfur subunit (ISP) transmembrane anchor iron-sulfur subunit (ISP) transmembrane anchor iron-sulfur subunit (ISP) transmembrane anchor
e1l0nE3 E:70-196 ISP domain ISP domain ISP domain
e1l0nF1 F:12-110 14 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) 14 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) 14 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)
e1l0nG1 G:1-75 Ubiquinone-binding protein QP-C of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) Ubiquinone-binding protein QP-C of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) Ubiquinone-binding protein QP-C of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)
e1l0nH1 H:13-78 cytochrome bc1 complex 11 kDa protein-like Non-heme 11 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) Non-heme 11 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)
e1l0nI1 I:1-57 Ubiquinol-cytochrome c reductase 8 kDa protein Ubiquinol-cytochrome c reductase 8 kDa protein Ubiquinol-cytochrome c reductase 8 kDa protein
e1l0nJ1 J:1-58 Subunit X (non-heme 7 kDa protein) of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) Subunit X (non-heme 7 kDa protein) of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) Subunit X (non-heme 7 kDa protein) of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)
e1l0nK1 K:1-49 Subunit XI (6.4 kDa protein) of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) Subunit XI (6.4 kDa protein) of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) Subunit XI (6.4 kDa protein) of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)

Structural contacts of domain e1l0nB2 of H-group "LuxS, MPP, ThrRS/AlaRS common domain":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e1l0nA1 B:x,y,z->A:X,Y,Z LuxS, MPP, ThrRS/AlaRS common domain Interaction Interface Pymol
e1l0nA2 B:x,y,z->A:X,Y,Z LuxS, MPP, ThrRS/AlaRS common domain Interaction Interface Pymol
e1l0nI1 B:X,Y,Z->I:x,y,z Ubiquinol-cytochrome c reductase 8 kDa protein Interaction Interface Pymol
e1l0nB2 B:x,y,z->B:-X+1,-Y+1,Z LuxS, MPP, ThrRS/AlaRS common domain Interaction Interface Pymol
e1l0nB1 B:x,y,z->B:-X+1,-Y+1,Z LuxS, MPP, ThrRS/AlaRS common domain Interaction Interface Pymol
e1l0nB1 B:-X+1,-Y+1,Z->B:x,y,z LuxS, MPP, ThrRS/AlaRS common domain Interaction Interface Pymol
e1l0nB2 B:-X+1,-Y+1,Z->B:x,y,z LuxS, MPP, ThrRS/AlaRS common domain Interaction Interface Pymol
e1l0nB1 B:x,y,z->B:X,-Y+3/2,-Z+1/4 LuxS, MPP, ThrRS/AlaRS common domain Interaction Interface Pymol
e1l0nB2 B:x,y,z->B:X,-Y+3/2,-Z+1/4 LuxS, MPP, ThrRS/AlaRS common domain Interaction Interface Pymol
e1l0nB2 B:X,-Y+3/2,-Z+1/4->B:x,y,z LuxS, MPP, ThrRS/AlaRS common domain Interaction Interface Pymol
e1l0nB1 B:X,-Y+3/2,-Z+1/4->B:x,y,z LuxS, MPP, ThrRS/AlaRS common domain Interaction Interface Pymol